7 Commits

Author SHA1 Message Date
Andrey Antukh
93d36d04d8
✨ Stabilize fragmented file data across snapshots and GC (#12420)
* ✨ Stabilize fragmented file data across snapshots and GC

Snapshots, automatic and user, now store pointer-based rows that share
fragments with the live file instead of duplicating page content.
`get-file-snapshot` resolves those pointers on the server so version
previews keep rendering plain data, and `restore!` reuses the shared
rows. Export still materializes (the package carries no fragments) and
import regenerates them.

`file-gc` treats the main file and every unpurged snapshot as liveness
roots, reads the file unrealized, and reattaches the original pointer
wherever the cleaned value is unchanged, so a pass over an untouched
file writes no fragments and a pass over an edited file keeps the ids
of the pages it did not touch. Snapshot creation and the restore
backup take the file row `FOR SHARE`, which serializes them with the
pass and closes the race that let a new snapshot reference fragments
the pass was about to mark.

All backend pointer bindings go through the `fdata/with-pointers`,
`with-tracked`, `with-tracked-pointers` and `with-untracked` macros.
The loader reads fragments a previous pass marked until `objects-gc`
purges them, and the frontend fails loudly with retry instead of
dropping an unresolved fragment.

Review fixes in this branch: the automatic snapshot attaches before
pending migrations, `realize-pointers` is the single verb,
`reattach-unchanged` takes the identity fast path, the restore guard
takes its revn from the backup read, and `PointerMap.withMeta`
generates a fresh id when metadata changes.

Tests cover both snapshot writers (red without the lock), snapshot
sharing and pin release through the real delete and purge paths,
reattach against orphan marking, preview after offload, the pointer
binding contracts and the with-meta id change.

Closes #12410

AI-assisted-by: muse-spark-1.3-contributor
AI-assisted-by: deepseek-v4.1-flash

♻️ Pin no-churn behavior for untouched pages

Pin the behavior the churn verification measured: a save keeps the
fragment id of every page it does not touch, with a page of eleven keys
(PersistentHashMap), a 46-shape objects map and a nine-page index (hash
map). Also pin the mixed case: a data-level objects-map flip rewrites
the old pointer pages once and the next save keeps the new ids.

The memory records the identity rule behind it: re-assoc with the same
value returns the same map in array and hash maps alike.

Closes #12410

AI-assisted-by: deepseek-v4.1-flash

⚡ Stop loading untouched pages when enabling objects-map

`enable-objects-map` wrapped every page on every save, and reading a
page's objects forced its PointerMap to load the fragment. A save of
one page in a seven-page file therefore made seven fragment reads.

Skip unloaded pointers: their fragment was already wrapped by the
encode-file that wrote it, so loading it only to wrap it again is a
no-op. The save now loads only the pages it edits. A page with a plain
fragment (a data-level feature flip) keeps its plain fragment until it
is first loaded or edited; a migration that enables the feature must
rewrite the data itself.

Cover the change with load-count tests for save and restore, update the
flip test to the new contract, and drop the stale restore comment.

Closes #12410

AI-assisted-by: deepseek-v4.1-flash

⚡ Keep page fragment ids through pending migrations

Applying a pending migration on read realized the file, ran the
migration and persisted it again; the persist wrapped every plain page
in a new PointerMap, so every page got a new fragment id even when the
migration did not change it. That leaves the fragment cache cold and
rewrites every fragment on the first read after a deploy.

Capture the original pointers before realizing, reattach the unchanged
positions after migrating (same value comparison file-gc already uses),
persist the reattached file and return the realized one: the read
contract is plain data. Read-only connections skip the persist and the
reattach. A migration that adds objects-map skips the reattach so the
pages get wrapped.

Move the three helpers to fdata so file-gc and the migration path share
them, and cover the path with a real 0031 migration test: the unchanged
page keeps its id, the changed page gets a new one, the caller gets
realized data and a second read does not migrate again.

Closes #12410

AI-assisted-by: deepseek-v4.1-flash

* 🐛 Realize library pointers with each library's own loader

Fragment rows are keyed by file id, and every caller binds the
fragment loader of the file it works on. get-resolved-file-libraries
returned libraries with their pages still as pointers, so the first
read of a library page under fdata/pointer-map asked the consuming
file for the fragment and failed with :fragment-not-found. That
broke migrations and file validation for every file using a
pointer-mapped library.

The weak-map loader now realizes each library's pointers with the
library's own id. The test fails without the change.

AI-assisted-by: claude-opus-5-5
Signed-off-by: Álvaro Tejero Cantero <alvorithm@teje.ro>

* 🐛 Restore the pointer-map require the repair path still needs

The branch dropped `app.util.pointer-map` from the namespace while the
auto-repair path (added to develop before this branch) still rebinds
`pmap/*tracked*` around validation and repair in
`repair-preexisting-damage` and `process-changes-and-validate`. The
namespace did not compile, so the whole backend failed to load.

Those toggles do not fit the fdata macros: `with-untracked` binds nil
and `with-tracked` creates a fresh atom, while the repair path has to
turn tracking off and restore the existing atom (and read it before the
repair starts). Restore the require and keep the bindings explicit.

Also pin the feature-off path with a test: with `fdata/pointer-map` off
(the default), a save creates no fragments, file-gc writes nothing and
the snapshot preview still returns plain data. Drop a stray `\n` char
literal left at the end of one deftest.

Update the memories with the exception to the macro rule, the snapshot
FOR SHARE locking and the pre-migration automatic snapshot.

Closes #12410

AI-assisted-by: deepseek-v4.1-flash

* 🐛 Validate debug files with their own pointer loader

The `/dbg/actions` file validation passed the file id where
`get-resolved-file-libraries` expects the file map, so the library map
was seeded with a nil key. It also validated a file read without
realizing it, so the first page lookup of a pointer-mapped file raised
"load is not supported when *load-fn* is not bind" and the endpoint
could not validate exactly the files the feature touches.

Read the file realized (validation walks every page and component
anyway) and build the library map from the file. The library loader
already resolves each library's pointers with its own id, so the
realized file and its libraries validate as plain data. Covered by a
handler-level test that fails before the change.

AI-assisted-by: deepseek-v4.1-flash

* ♻️ Bind the snapshot loader through the fdata helper

`reduce-snapshots` hand-rolled the same `binding` that
`fdata/with-pointers` builds (it also loaded the function's own
pointer loader before entering the reduction). Use the macro so the
rule holds there too and the namespace no longer needs
`app.util.pointer-map`; the loader is identical (same cfg and file-id)
and snapshot walking behaves the same.

AI-assisted-by: deepseek-v4.1-flash

* 📚 Note the pointer-binding exceptions and snapshot ordering

Record what the feature review settled:

- Two direct `binding`s stay on purpose: the fine-grained `*tracked*`
  toggles of `app.rpc.commands.files-update` (validation/repair turn
  tracking off and restore the existing atom) and
  `binfile.common/encode-file` (fresh tracked set inheriting the
  current one). Atom-scoped macros would only be worth it if the set
  grows.
- The automatic snapshot is taken before the pending migration, and
  the pre-migration window is narrow: the `get-file` RPC migrates on
  read and its ETag hashes the available migrations, so a post-deploy
  read cannot be a 304 from the pre-deploy state. The old-format
  snapshot only appears when the save is the first request to touch
  the file after the deploy, and `get-file-snapshot` previews it as
  stored.

AI-assisted-by: deepseek-v4.1-flash

* 🐛 Apply pending migrations when previewing a version

Automatic snapshots are attached before the save applies pending file
migrations, so a version can store the old format. The preview RPC
handed that data to the UI as stored, and the viewport renders it with
the current code.

Realize the snapshot with the live file id (fragments are keyed by
file, not by snapshot), normalize its migrations to a set (the decoder
keeps the pgarray as a vector, and `set/difference` would compare
indexes) and apply the pending migrations with the pure
`fmg/migrate-file` and the live libraries. Nothing is persisted: the
stored version keeps its data and restoring it re-migrates on the next
read. The response now carries the snapshot's migrations.

Use `:features` the way `get-file` does for `fdata/objects-map`: a
client that does not declare it gets plain objects. The historical
feature set is not checked against the enabled one on purpose: a
version may predate a feature change.

Cover the preview of a snapshot with a pending migration and the
objects realization; both pin that the stored row is untouched. Update
the file-data memory with the preview contract and the vector/set
trap.

AI-assisted-by: deepseek-v4.1-flash

* 🐛 Decode snapshot migrations as an ordered set

`file-snapshots/decode-snapshot` handed the `file_change.migrations`
pgarray as a vector. `set/difference` falls back to index lookups when
the first collection is shorter than the second, so the pending set was
right only by accident: a stored subset happens to work, while a
stored set larger than `available-migrations` (a snapshot taken by a
newer build) marks every available migration as pending and re-applies
it to already migrated data.

Decode it as a `d/ordered-set`, the type the rest of the code and
`schema:file` expect. This also covers `restore!` and the snapshot
list, and it lets `get-file-snapshot` drop the `(into #{} ...)`
normalization it was carrying. Re-wrap the union in `fmg/migrate` so
the invariant holds even when a caller hands a plain set.

A snapshot with NULL `migrations` predates SQL migration 0140 and
keeps the format version of its time. Pin that legacy path: the
preview regenerates the applied set from that version, migrates in
memory and leaves the stored row untouched. Update the file-data
memory with the invariant and the legacy path.

AI-assisted-by: deepseek-v4.1-flash

* 🐛 Fix flaky waiting-gauge assertion in climit test

The throwable-while-waiting test asserted the exact list of
waiting-gauge publications, but the component sampler republishes
the same count when its first tick lands inside the recorded
window under load. Assert only the last value, which is the
contract the helper documents.

AI-assisted-by: muse-spark-1.3

---------

Signed-off-by: Álvaro Tejero Cantero <alvorithm@teje.ro>
Co-authored-by: Álvaro Tejero Cantero <alvorithm@teje.ro>
2026-11-02 15:02:55 +01:00
Andrey Antukh
3cc91e8ba2
♻️ Take the command limits before the root ones in the RPC limiter (#12686)
* ♻️ Take the command limits before the root ones in the RPC limiter

The RPC concurrency limiter took the root limiters (the ones every request
passes through) before the ones a command declares, so a request waiting for
the limits of its own command held the root permits of its profile while it
waited: a profile with a pile-up of heavy requests saw its other requests
queue behind them and be rejected with 429.

That order was forced by two commands that entered the limiter from inside
their handler: a command that declares no limits of its own can only take
them deeper than the root ones, so two paths of one profile could take the
same limiters in opposite order and park for good.

The commands declare their limits in their metadata now and their handlers
call the work directly, so no command enters the limiter from inside its
handler and every path takes the limiters in the same order. The root
limiters are appended to the sequence first, so the limits a command
declares end up outermost and are taken first: a request waiting for them
does not hold the root permits of its profile. The photo of a team keeps its
limits, because it declares them now that the helper does not.

A call from inside a handler can only reenter the limits that thread
already holds, and it is refused when it asks for a new one, because that
would take it after the root ones and invert the order against the other
paths. The key of a limit is resolved the same way in every path, so both
paths point at the same limiter and the reentrancy check sees it.

Every entry of the shipped climit.edn declares a queue, so the number of
requests waiting for the same limit is bounded instead of piling up until
the timeout. The production file lives outside the repository and has to be
mirrored to pick them up.

The tests cover the acquisition order of a command with and without limits
of its own, the order of the limits as a whole (a ring of any size fails,
not only a pair in opposite order), the nested call that asks for a limit
the thread does not hold, and the queues and timeouts of the shipped
configuration. The import of a binfile declares its request as multipart in
its test, the way the commands that take an upload map do.

AI-assisted-by: minimax-m3.1-flash
AI-assisted-by: deepseek-v4.1-flash

* 🔧 Keep the commands' limits and the shipped config in sync

`profile-plugin-ops` guarded only an UPDATE on the caller's own profile row,
which the row lock already serializes, so its global cap could only reject a
burst of different profiles toggling plugins. Both commands declare the
by-profile limit alone now, and the example config drops the entry.

A declared id without an entry does not limit anything: `wrap` logs a warning
and runs the handler with no limiter at all, which is how a command ends up
unbounded in production. A test fails now when a command declares an id the
config does not list, and the header of the example says the production file
mirrors the shape and lists every declared id, not the values.

AI-assisted-by: deepseek-v4.1-flash

* 📚 Record that background work is not waited for with a sleep

A long command moved to the background reports its own completion, so
polling it with a sleep inside a foreground command only blocks the session
and the notification arrives anyway. The rule says to keep working on
something else, or to end the response and wait for it.

AI-assisted-by: minimax-m3.1-flash
2026-10-28 18:44:36 +01:00
Andrey Antukh
fdd66978fd Merge branch 'main' into staging 2026-10-19 20:10:20 +02:00
Andrey Antukh
84d92cfd5a
✨ Add tail buckets and update-file validation timings (#12409)
* ✨ Extend backend histogram buckets beyond 7.5s

Give every backend timing histogram a tail past the shared 7500ms cap
so slow RPC calls, CLIMIT waits and background tasks report real
quantiles instead of clipping at the top bucket.

Request and wait metrics grow to 60s, background tasks to 300s and
Redis eval to 10s; the sub-7.5s buckets stay untouched to keep the
history comparable.

Closes #12408

AI-assisted-by: muse-spark-1.3-contributor

* 🐛 Fix flaky assertion in climit republish test

Read the last published waiting value instead of the exact
publication list. The sampler thread started with the component
runs its first tick asynchronously, and when it lands inside the
recording window it publishes the same count twice, which made
the full-suite CI run fail while focused runs stayed green.

AI-assisted-by: muse-spark-1.3-contributor

* ✨ Add file_data blob to JSON decode helper

Allow decoding file_data blobs (app.util.blob) to JSON
for investigations with jq, offline from a blob file or
from nREPL with the backend running.

AI-assisted-by: muse-spark-1.3-contributor

* ✨ Add validation step timings to update-file logs and metrics

Measure the six phases inside process-changes-and-validate
(resolve-libs, process-changes, soft and hard affected and
schema validations) with tpoint and try/finally, so timings
are recorded even when a hard validation throws.

Publish each phase to a new histogram
penpot_rpc_update_file_validation_timing with a fixed step
label using the request buckets (up to 60000 ms), and extend
the update-file debug log with the same *-ms fields plus
file, project and team ids. The deferred log only runs on
success, so failures get an inline error log with partial
timings.

AI-assisted-by: muse-spark-1.3-contributor

* 💄 Translate decode-file-data comments to English

Translate the Spanish docstrings, section headers and test
messages of the file_data decode helper to English, keeping
code untouched. The repo convention is English in code and
comments; the helper was first written in Spanish.

AI-assisted-by: muse-spark-1.3-contributor
2026-10-19 13:01:35 +02:00
Andrey Antukh
57ed11942c 🐛 Fix the broken restore test and the flaky climit test
The merge of main into staging brought the closed storage metadata
schema, which requires file-id and id on file-data objects. The
restore test built one without those keys, so it failed with an
invalid metadata error. Its helper now takes extra metadata and
the test passes the ids of the file and of its file-data row, as
production does.

The republish test asserted the exact list of waiting-gauge
publications, but the component's sampler starts its first tick right
away and under load lands inside the recorded window, publishing the
same count twice. The test now builds the counters alone, so the
republish call is the only publisher.

AI-assisted-by: deepseek-v4.1-flash
2026-10-13 18:44:40 +00:00
Andrey Antukh
5c476b4d9c ✨ Make the CLIMIT queue visible with an accumulated gauge
The queue gauge was written by whichever limiter of a name ran last, so a
per-profile pile-up never showed: a healthy profile writing 0 overwrote the
15 of the profile that was queueing (4 of 1441 samples in production), and
a limiter whose requests never come back read 0 while 72 threads stayed
parked.

A queue is an entry and an exit, so the new gauge is accumulated: one
counter per limiter name and instance, up when a call starts waiting for a
permit, down when it stops, so a call that never leaves stays visible. It
is always written with `:val`, and a daemon sampler republishes every count
every 15s so a name whose traffic died does not go stale in the scrape;
halting the component stops that thread.

Rejections had no metric at all: penpot_rpc_climit_rejected_total counts
them by name and reason (queue-full or timeout), and the log lines now
carry queue-max, permits, code and reason, so an operator can tell whether
the limiter did its job or was saturated.

The gauges that could not tell the truth are gone: queue and permits (same
last-write-wins problem, and waiting plus the wait histogram replace them)
and http_worker_busy_threads (reads 0 on an instance with 72 blocked
threads; pool_size is the signal). No other dashboard or alert rule reads
them.

AI-assisted-by: deepseek-v4.1-flash
2026-10-13 14:33:32 +02:00
Andrey Antukh
f242ff9574 🐛 Keep concurrency limits from deadlocking on nested calls
An instance left the audit events pipeline dead: every push-audit-events
answered with 429 and 69 worker threads parked for good inside a limiter.

Two code paths of one profile acquired the same two limiters in opposite
order: a command declaring its own limits (upload-file-media-object) took
process-image/by-profile and then root/by-profile, while a command with no
limits of its own took the roots first and then re-entered climit from
inside its handler with the same ids (create-file-media-object-from-url).
Each path held what the other one waited for, and no limiter had a timeout
to break the wait.

Now wrap puts the root limiters after the command's own, so they end up
outermost and every path meets them first: the nested chains carry only the
command's own limits and run inside them, which puts both paths in the same
order. impl-invoke also keeps, per thread, the set of limiters that thread
is inside of and runs the handler inline when a call asks for one it
already holds, so a handler can no longer queue behind itself.

The shipped climit.edn sets a timeout on every limiter (60s for operations
that can be slow, 30s otherwise), so no wait can park a thread for ever.
The production file lives outside the repository and has to be mirrored.

Tests cover the acquisition order, the deadlock, the reentrancy and the
timeouts of the shipped config.

AI-assisted-by: deepseek-v4.1-flash
2026-10-13 14:33:32 +02:00