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https://github.com/bytedance/deer-flow.git
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* feat(persistence): support custom postgres schema * fix(persistence): address CI lint/test failures and review feedback - Map missing psycopg import to actionable POSTGRES_INSTALL guidance in sync/async schema-creation helpers - Accept SQLAlchemy compound DSN schemes (postgresql+asyncpg) when injecting search_path, normalizing to a libpq-consumable DSN - Guard keyword-DSN tests with importorskip so they skip without psycopg - Set database=None in sync checkpointer none-fix test to avoid MagicMock backend resolution - Apply ruff import sort and format * fix(persistence): address pg-schema review feedback - Restrict postgres_schema regex to lowercase-only so the quoted CREATE SCHEMA matches the unquoted search_path (PG case-folds it), fixing the mixed-case bug where tables silently fell back to public. - Replace shlex.join/split with libpq-correct backslash escaping for the options parameter so values containing spaces survive intact. - Add normalize_libpq_dsn() and route the async checkpointer pool through dsn_with_search_path() so a +asyncpg suffix is stripped and existing DSN options (e.g. statement_timeout) are merged instead of overridden. - Extract shared ensure_postgres_schema()/ensure_postgres_schema_async() helpers (mapping missing psycopg to the install hint) used by all four provider sites. - Tests: reject mixed-case schemas, preserve space-containing libpq option, cover normalize_libpq_dsn, and assert pool search_path via DSN. * fix(persistence): align pg-schema test with merged store API The main merge moved the sync Store factory to the single-path _resolve_store_config/_sync_store_cm design, dropping the PR's _sync_store_from_database helper. The integration test still imported the removed symbol, breaking test collection (backend-unit-tests). Resolve the store config from a DatabaseConfig and drive it through _sync_store_cm instead. * fix(persistence): address pg-schema review feedback - reject trailing/leading whitespace in postgres_schema via re.fullmatch (a $-anchored re.match let "deerflow\n" through, silently landing tables in public) - re-escape all whitespace (TAB/CR/LF) when re-joining libpq options so a caller's pre-existing options value round-trips losslessly - re-validate the identifier inside create_schema_sql as defense-in-depth at the SQL-emitting boundary - accept the postgres:// short scheme in the alembic search_path injection - close the sync psycopg connection explicitly (psycopg3 __exit__ does not close()), mirroring the async path - drop the partial checkpointer/store reset on a database config change; database is restart-required and the ORM engine is not rebuilt, so a partial reset would half-migrate the deployment * docs(config): complete the postgres_schema migration checklist Address PR review (P1): the documented `public`->schema migration only moved runs, run_events, threads_meta, feedback, and users. That strands every other DeerFlow-owned table -- the four channel_* tables, both scheduled_* tables, agents, and (critically) alembic_version -- in `public`. On restart bootstrap treats the partially-populated target schema as unversioned, re-baselines it, and replays migrations while the real rows stay invisible in `public`. List the full owned set explicitly, call out alembic_version as required, and keep the "discover the rest" query for version-drift safety. * refactor(checkpointer): drop test-only _sync_checkpointer_from_database Address PR review: the helper was only reached by the env-gated integration test and re-implemented the DatabaseConfig->CheckpointerConfig backend resolution that _resolve_checkpointer_config already owns, so a future backend added there would silently miss this path. Mirror the store side of the same test, which reuses the production path directly: _resolve_checkpointer_config(...) + _sync_checkpointer_cm(...).
484 lines
19 KiB
Python
484 lines
19 KiB
Python
"""Tests for the persistence layer scaffolding.
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Tests:
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1. DatabaseConfig property derivation (paths, URLs)
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2. MemoryRunStore CRUD + user_id filtering
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3. Base.to_dict() via inspect mixin
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4. Engine init/close lifecycle (memory + SQLite)
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5. Postgres missing-dep error message
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"""
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import sys
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from datetime import UTC, datetime
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from unittest.mock import AsyncMock, patch
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import pytest
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from deerflow.config.database_config import DatabaseConfig
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from deerflow.runtime.runs.store.memory import MemoryRunStore
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# -- DatabaseConfig --
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class TestDatabaseConfig:
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def test_defaults(self):
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c = DatabaseConfig()
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assert c.backend == "memory"
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assert c.pool_size == 5
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def test_sqlite_paths_unified(self):
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c = DatabaseConfig(backend="sqlite", sqlite_dir="./mydata")
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assert c.sqlite_path.endswith("deerflow.db")
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assert "mydata" in c.sqlite_path
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# Backward-compatible aliases point to the same file
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assert c.checkpointer_sqlite_path == c.sqlite_path
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assert c.app_sqlite_path == c.sqlite_path
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def test_app_sqlalchemy_url_sqlite(self):
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c = DatabaseConfig(backend="sqlite", sqlite_dir="./data")
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url = c.app_sqlalchemy_url
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assert url.startswith("sqlite+aiosqlite:///")
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assert "deerflow.db" in url
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def test_app_sqlalchemy_url_postgres(self):
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c = DatabaseConfig(
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backend="postgres",
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postgres_url="postgresql://u:p@h:5432/db",
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)
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url = c.app_sqlalchemy_url
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assert url.startswith("postgresql+asyncpg://")
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assert "u:p@h:5432/db" in url
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def test_app_sqlalchemy_url_postgres_short_scheme(self):
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c = DatabaseConfig(
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backend="postgres",
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postgres_url="postgres://u:p@h:5432/db",
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)
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url = c.app_sqlalchemy_url
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assert url.startswith("postgresql+asyncpg://")
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assert "u:p@h:5432/db" in url
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def test_app_sqlalchemy_url_postgres_already_asyncpg(self):
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c = DatabaseConfig(
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backend="postgres",
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postgres_url="postgresql+asyncpg://u:p@h:5432/db",
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)
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url = c.app_sqlalchemy_url
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assert url.count("asyncpg") == 1
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def test_memory_has_no_url(self):
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c = DatabaseConfig(backend="memory")
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with pytest.raises(ValueError, match="No SQLAlchemy URL"):
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_ = c.app_sqlalchemy_url
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def test_postgres_schema_default_empty(self):
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c = DatabaseConfig()
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assert c.postgres_schema == ""
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@pytest.mark.parametrize("schema", ["deerflow", "my_schema", "_private", "s", "a" * 63])
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def test_postgres_schema_accepts_valid_identifier(self, schema):
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c = DatabaseConfig(backend="postgres", postgres_url="postgresql://u:p@h:5432/db", postgres_schema=schema)
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assert c.postgres_schema == schema
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@pytest.mark.parametrize(
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"schema",
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[
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"1abc",
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"a b",
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"a;b",
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"a-b",
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"a" * 64,
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'a"b',
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"MySchema",
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"Orders",
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"Public",
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# Trailing/leading whitespace must be rejected: a ``$``-anchored
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# ``re.match`` accepts a single trailing ``\n``, which would create a
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# quoted schema literally named ``deerflow\n`` while the unquoted
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# search_path folds to ``deerflow`` and misses it (tables land in
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# ``public``). ``re.fullmatch`` on an unanchored pattern rejects it.
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"deerflow\n",
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"deerflow\t",
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"\ndeerflow",
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"deerflow ",
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],
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)
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def test_postgres_schema_rejects_invalid_identifier(self, schema):
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from pydantic import ValidationError
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with pytest.raises(ValidationError):
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DatabaseConfig(backend="postgres", postgres_url="postgresql://u:p@h:5432/db", postgres_schema=schema)
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def test_postgres_schema_does_not_pollute_url(self):
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c = DatabaseConfig(backend="postgres", postgres_url="postgresql://u:p@h:5432/db", postgres_schema="deerflow")
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url = c.app_sqlalchemy_url
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assert "deerflow" not in url.replace("/db", "")
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assert url.startswith("postgresql+asyncpg://")
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# -- MemoryRunStore --
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class TestMemoryRunStore:
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@pytest.fixture
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def store(self):
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return MemoryRunStore()
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@pytest.mark.anyio
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async def test_put_and_get(self, store):
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await store.put("r1", thread_id="t1", status="pending")
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row = await store.get("r1")
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assert row is not None
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assert row["run_id"] == "r1"
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assert row["status"] == "pending"
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@pytest.mark.anyio
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async def test_get_missing_returns_none(self, store):
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assert await store.get("nope") is None
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@pytest.mark.anyio
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async def test_update_status(self, store):
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await store.put("r1", thread_id="t1")
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await store.update_status("r1", "running")
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assert (await store.get("r1"))["status"] == "running"
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@pytest.mark.anyio
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async def test_update_status_with_error(self, store):
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await store.put("r1", thread_id="t1")
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await store.update_status("r1", "error", error="boom")
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row = await store.get("r1")
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assert row["status"] == "error"
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assert row["error"] == "boom"
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@pytest.mark.anyio
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async def test_list_by_thread(self, store):
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await store.put("r1", thread_id="t1")
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await store.put("r2", thread_id="t1")
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await store.put("r3", thread_id="t2")
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rows = await store.list_by_thread("t1")
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assert len(rows) == 2
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assert all(r["thread_id"] == "t1" for r in rows)
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@pytest.mark.anyio
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async def test_list_by_thread_owner_filter(self, store):
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await store.put("r1", thread_id="t1", user_id="alice")
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await store.put("r2", thread_id="t1", user_id="bob")
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rows = await store.list_by_thread("t1", user_id="alice")
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assert len(rows) == 1
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assert rows[0]["user_id"] == "alice"
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@pytest.mark.anyio
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async def test_owner_none_returns_all(self, store):
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await store.put("r1", thread_id="t1", user_id="alice")
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await store.put("r2", thread_id="t1", user_id="bob")
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rows = await store.list_by_thread("t1", user_id=None)
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assert len(rows) == 2
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@pytest.mark.anyio
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async def test_delete(self, store):
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await store.put("r1", thread_id="t1")
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await store.delete("r1")
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assert await store.get("r1") is None
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@pytest.mark.anyio
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async def test_delete_nonexistent_is_noop(self, store):
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await store.delete("nope") # should not raise
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@pytest.mark.anyio
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async def test_list_by_thread_unknown_thread_is_empty(self, store):
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await store.put("r1", thread_id="t1")
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assert await store.list_by_thread("missing") == []
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@pytest.mark.anyio
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async def test_list_by_thread_newest_first(self, store):
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await store.put("r1", thread_id="t1", created_at="2024-01-01T00:00:00+00:00")
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await store.put("r2", thread_id="t1", created_at="2024-01-03T00:00:00+00:00")
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await store.put("r3", thread_id="t1", created_at="2024-01-02T00:00:00+00:00")
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rows = await store.list_by_thread("t1")
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assert [r["run_id"] for r in rows] == ["r2", "r3", "r1"]
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@pytest.mark.anyio
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async def test_list_by_thread_respects_limit(self, store):
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for i in range(5):
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await store.put(f"r{i}", thread_id="t1", created_at=f"2024-01-0{i + 1}T00:00:00+00:00")
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rows = await store.list_by_thread("t1", limit=2)
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assert [r["run_id"] for r in rows] == ["r4", "r3"]
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@pytest.mark.anyio
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async def test_delete_keeps_thread_index_consistent(self, store):
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await store.put("r1", thread_id="t1")
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await store.put("r2", thread_id="t1")
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await store.delete("r1")
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rows = await store.list_by_thread("t1")
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assert [r["run_id"] for r in rows] == ["r2"]
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# deleting the last run in a thread drops the now-empty index bucket
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await store.delete("r2")
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assert await store.list_by_thread("t1") == []
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assert "t1" not in store._runs_by_thread
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@pytest.mark.anyio
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async def test_aggregate_tokens_by_thread_scopes_to_thread(self, store):
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await store.put("r1", thread_id="t1")
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await store.update_run_completion("r1", status="success", model_name="m-a", total_tokens=100)
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await store.put("r2", thread_id="t1")
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await store.update_run_completion("r2", status="error", model_name="m-a", total_tokens=20)
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await store.put("r3", thread_id="t2")
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await store.update_run_completion("r3", status="success", model_name="m-b", total_tokens=999)
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agg = await store.aggregate_tokens_by_thread("t1")
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assert agg["total_tokens"] == 120 # the other thread's run is excluded
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assert agg["total_runs"] == 2
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assert agg["by_model"]["m-a"] == {"tokens": 120, "runs": 2}
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assert "m-b" not in agg["by_model"]
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@pytest.mark.anyio
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async def test_aggregate_tokens_by_thread_excludes_active_unless_requested(self, store):
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await store.put("r1", thread_id="t1")
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await store.update_run_completion("r1", status="success", total_tokens=10)
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await store.put("r2", thread_id="t1")
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await store.update_run_completion("r2", status="running", total_tokens=5)
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assert (await store.aggregate_tokens_by_thread("t1"))["total_tokens"] == 10
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assert (await store.aggregate_tokens_by_thread("t1", include_active=True))["total_tokens"] == 15
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@pytest.mark.anyio
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async def test_aggregate_tokens_by_thread_unknown_thread_is_zero(self, store):
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await store.put("r1", thread_id="t1")
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await store.update_run_completion("r1", status="success", total_tokens=10)
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agg = await store.aggregate_tokens_by_thread("missing")
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assert agg["total_tokens"] == 0
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assert agg["total_runs"] == 0
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assert agg["by_model"] == {}
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@pytest.mark.anyio
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async def test_aggregate_tokens_by_thread_matches_full_scan_reference(self, store):
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plan = [
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("r0", "t1", "success", "m-a", 10),
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("r1", "t1", "error", "m-b", 20),
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("r2", "t1", "running", "m-a", 7),
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("r3", "t2", "success", "m-a", 999),
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("r4", "t1", "pending", "m-a", 3),
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]
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for run_id, thread_id, status, model, tokens in plan:
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await store.put(run_id, thread_id=thread_id)
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await store.update_run_completion(run_id, status=status, model_name=model, total_tokens=tokens)
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def _reference(thread_id, include_active):
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statuses = ("success", "error", "running") if include_active else ("success", "error")
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completed = [r for r in store._runs.values() if r["thread_id"] == thread_id and r.get("status") in statuses]
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return len(completed), sum(r.get("total_tokens", 0) for r in completed)
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for thread_id in ("t1", "t2", "missing"):
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for include_active in (False, True):
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agg = await store.aggregate_tokens_by_thread(thread_id, include_active=include_active)
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ref_runs, ref_tokens = _reference(thread_id, include_active)
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assert (agg["total_runs"], agg["total_tokens"]) == (ref_runs, ref_tokens), (thread_id, include_active)
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@pytest.mark.anyio
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async def test_list_pending(self, store):
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await store.put("r1", thread_id="t1", status="pending")
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await store.put("r2", thread_id="t1", status="running")
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await store.put("r3", thread_id="t2", status="pending")
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pending = await store.list_pending()
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assert len(pending) == 2
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assert all(r["status"] == "pending" for r in pending)
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@pytest.mark.anyio
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async def test_list_pending_respects_before(self, store):
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past = "2020-01-01T00:00:00+00:00"
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future = "2099-01-01T00:00:00+00:00"
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await store.put("r1", thread_id="t1", status="pending", created_at=past)
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await store.put("r2", thread_id="t1", status="pending", created_at=future)
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pending = await store.list_pending(before=datetime.now(UTC).isoformat())
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assert len(pending) == 1
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assert pending[0]["run_id"] == "r1"
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@pytest.mark.anyio
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async def test_list_pending_fifo_order(self, store):
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await store.put("r2", thread_id="t1", status="pending", created_at="2024-01-02T00:00:00+00:00")
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await store.put("r1", thread_id="t1", status="pending", created_at="2024-01-01T00:00:00+00:00")
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pending = await store.list_pending()
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assert pending[0]["run_id"] == "r1"
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# -- Base.to_dict mixin --
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class TestBaseToDictMixin:
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@pytest.mark.anyio
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async def test_to_dict_and_exclude(self, tmp_path):
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"""Create a temp SQLite DB with a minimal model, verify to_dict."""
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from sqlalchemy import String
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from sqlalchemy.ext.asyncio import async_sessionmaker, create_async_engine
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from sqlalchemy.orm import Mapped, mapped_column
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from deerflow.persistence.base import Base
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class _Tmp(Base):
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__tablename__ = "_tmp_test"
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id: Mapped[str] = mapped_column(String(64), primary_key=True)
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name: Mapped[str] = mapped_column(String(128))
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engine = create_async_engine(f"sqlite+aiosqlite:///{tmp_path / 'test.db'}")
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try:
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async with engine.begin() as conn:
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await conn.run_sync(Base.metadata.create_all)
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sf = async_sessionmaker(engine, expire_on_commit=False)
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async with sf() as session:
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session.add(_Tmp(id="1", name="hello"))
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await session.commit()
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obj = await session.get(_Tmp, "1")
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assert obj.to_dict() == {"id": "1", "name": "hello"}
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assert obj.to_dict(exclude={"name"}) == {"id": "1"}
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assert "_Tmp" in repr(obj)
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finally:
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await engine.dispose()
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Base.metadata.remove(_Tmp.__table__)
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# -- Engine lifecycle --
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class TestEngineLifecycle:
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@pytest.mark.anyio
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async def test_memory_is_noop(self):
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from deerflow.persistence.engine import close_engine, get_session_factory, init_engine
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await init_engine("memory")
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assert get_session_factory() is None
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await close_engine()
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@pytest.mark.anyio
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async def test_sqlite_creates_engine(self, tmp_path):
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from deerflow.persistence.engine import close_engine, get_session_factory, init_engine
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url = f"sqlite+aiosqlite:///{tmp_path / 'test.db'}"
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await init_engine("sqlite", url=url, sqlite_dir=str(tmp_path))
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sf = get_session_factory()
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assert sf is not None
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async with sf() as session:
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assert session is not None
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await close_engine()
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assert get_session_factory() is None
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@pytest.mark.anyio
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async def test_postgres_without_asyncpg_gives_actionable_error(self):
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"""If asyncpg is not installed, error message tells user what to do."""
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from deerflow.persistence.engine import init_engine
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with (
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patch.dict(sys.modules, {"asyncpg": None}),
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pytest.raises(ImportError, match="uv sync --all-packages --extra postgres"),
|
|
):
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|
await init_engine("postgres", url="postgresql+asyncpg://x:x@localhost/x")
|
|
|
|
|
|
def _make_fake_pg_engine():
|
|
"""Build a fake async engine whose begin()/dispose() are awaitable mocks.
|
|
|
|
Tracks ordering of conn.execute (CREATE SCHEMA) vs conn.run_sync
|
|
(create_all) through a shared parent mock's ``mock_calls``.
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|
"""
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|
from unittest.mock import AsyncMock, MagicMock
|
|
|
|
calls = MagicMock()
|
|
conn = MagicMock()
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|
# Both are awaited by the engine code, so they must return awaitables.
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|
calls.execute = AsyncMock()
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|
calls.run_sync = AsyncMock()
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|
conn.execute = calls.execute
|
|
conn.run_sync = calls.run_sync
|
|
|
|
begin_cm = AsyncMock()
|
|
begin_cm.__aenter__.return_value = conn
|
|
begin_cm.__aexit__.return_value = False
|
|
|
|
engine = MagicMock()
|
|
engine.begin = MagicMock(return_value=begin_cm)
|
|
engine.dispose = AsyncMock()
|
|
return engine, calls
|
|
|
|
|
|
class TestPostgresSchemaInit:
|
|
@pytest.mark.anyio
|
|
async def test_passes_search_path_connect_args(self, monkeypatch):
|
|
import deerflow.persistence.engine as engine_module
|
|
|
|
monkeypatch.setitem(sys.modules, "asyncpg", object())
|
|
fake_engine, _calls = _make_fake_pg_engine()
|
|
captured = {}
|
|
|
|
def fake_create(_url, **kwargs):
|
|
captured.update(kwargs)
|
|
return fake_engine
|
|
|
|
monkeypatch.setattr(engine_module, "create_async_engine", fake_create)
|
|
monkeypatch.setattr("deerflow.persistence.bootstrap.bootstrap_schema", AsyncMock())
|
|
|
|
await engine_module.init_engine(
|
|
"postgres",
|
|
url="postgresql+asyncpg://u:p@h:5432/db",
|
|
postgres_schema="deerflow",
|
|
)
|
|
|
|
assert captured["connect_args"] == {
|
|
"command_timeout": engine_module.POSTGRES_COMMAND_TIMEOUT_SECONDS,
|
|
"server_settings": {"search_path": "deerflow"},
|
|
}
|
|
await engine_module.close_engine()
|
|
|
|
@pytest.mark.anyio
|
|
async def test_creates_schema_before_bootstrap(self, monkeypatch):
|
|
import deerflow.persistence.engine as engine_module
|
|
|
|
monkeypatch.setitem(sys.modules, "asyncpg", object())
|
|
fake_engine, calls = _make_fake_pg_engine()
|
|
monkeypatch.setattr(engine_module, "create_async_engine", lambda url, **kw: fake_engine)
|
|
calls.attach_mock(AsyncMock(), "bootstrap_schema")
|
|
monkeypatch.setattr("deerflow.persistence.bootstrap.bootstrap_schema", calls.bootstrap_schema)
|
|
|
|
await engine_module.init_engine(
|
|
"postgres",
|
|
url="postgresql+asyncpg://u:p@h:5432/db",
|
|
postgres_schema="deerflow",
|
|
)
|
|
|
|
names = [c[0] for c in calls.mock_calls]
|
|
assert "execute" in names
|
|
assert "bootstrap_schema" in names
|
|
# CREATE SCHEMA must run before the alembic bootstrap so the
|
|
# subsequent create_all / migration DDL lands in the target schema.
|
|
assert names.index("execute") < names.index("bootstrap_schema")
|
|
# The DDL passed to execute must be a CreateSchema for the target schema.
|
|
execute_arg = calls.execute.call_args[0][0]
|
|
assert "deerflow" in str(execute_arg)
|
|
await engine_module.close_engine()
|
|
|
|
@pytest.mark.anyio
|
|
async def test_empty_schema_skips_connect_args_and_ddl(self, monkeypatch):
|
|
import deerflow.persistence.engine as engine_module
|
|
|
|
monkeypatch.setitem(sys.modules, "asyncpg", object())
|
|
fake_engine, calls = _make_fake_pg_engine()
|
|
captured = {}
|
|
|
|
def fake_create(_url, **kwargs):
|
|
captured.update(kwargs)
|
|
return fake_engine
|
|
|
|
monkeypatch.setattr(engine_module, "create_async_engine", fake_create)
|
|
calls.attach_mock(AsyncMock(), "bootstrap_schema")
|
|
monkeypatch.setattr("deerflow.persistence.bootstrap.bootstrap_schema", calls.bootstrap_schema)
|
|
|
|
await engine_module.init_engine("postgres", url="postgresql+asyncpg://u:p@h:5432/db")
|
|
|
|
assert captured.get("connect_args", {}) == {
|
|
"command_timeout": engine_module.POSTGRES_COMMAND_TIMEOUT_SECONDS,
|
|
}
|
|
names = [c[0] for c in calls.mock_calls]
|
|
assert "execute" not in names # no CREATE SCHEMA
|
|
assert "bootstrap_schema" in names # bootstrap still runs
|
|
await engine_module.close_engine()
|