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Pin channel-triggered runs to the root checkpoint namespace and ensure thread_id is always present in configurable run config so follow-up replies resume the same conversation state. Add regression coverage to channel tests: assert checkpoint_ns/thread_id are passed in wait and stream paths add an integration-style clarification flow test that verifies the second user reply continues prior context instead of starting a new session This addresses history loss after ask_clarification interruptions (issue #2425).