21 Commits

Author SHA1 Message Date
Wenchao An
42334f26d7
feat(capabilities): unify catalog, plugin configuration and agent selection (#5497)
* feat(capabilities): unify catalog, plugin configuration and agent selection

* fix(capabilities): address review isolation, validation and demo issues

* fix(capabilities): preserve concurrent selections and guide launcher repair
2026-09-19 12:14:24 +08:00
Hyeonsang Cho
bc4a33aba7
fix(skills): stop persisting resolved secrets when toggling skills (#5357)
Toggling a skill wrote resolved secrets into extensions_config.json. The
Gateway skill toggle and DeerFlowClient.update_skill loaded the file with
ExtensionsConfig.from_file(), which replaces every "$VAR" string with the
environment value (and an unset variable with ""), then serialized that
model back through to_file_dict(). A "$GITHUB_TOKEN" reference was
persisted as the plaintext token, and an unset reference was erased for
good. DeerFlowClient.update_mcp_config had the same flaw for every key
other than mcpServers.

Every writer now does a raw read-modify-write, the way the MCP router
already did: read_raw_extensions_config reads the on-disk JSON,
set_raw_skill_enabled changes only the target entry, and
validate_raw_extensions_config checks the candidate the way the runtime
will load it before the atomic write. When the file does not exist yet,
the Gateway seeds it with the cached skill states only, never the
resolved cached model. The MCP router's raw loader and candidate
validation delegate to the same helpers, so the rule lives in one place,
and to_file_dict() is removed so the unsafe serialization has no entry
point left.

Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
2026-09-12 11:24:46 +08:00
Aari
340bff1107
feat(mcp): manage servers from Settings (#5022)
* feat(mcp): manage servers from settings

* fix(mcp): make settings updates targeted

* fix(mcp): reject ambiguous masked array edits

* fix(mcp): honor targeted server field deletions

* fix(mcp): preserve OAuth extension secrets

* fix(mcp): validate config before persistence

* fix(mcp): preserve environment placeholders

* fix(mcp): harden targeted configuration routes

* docs: keep gateway guidance within budget

* fix(mcp): protect per-tool override secrets

* fix(mcp): keep disabled edits structurally safe
2026-09-01 23:24:49 +08:00
青榆牧
a94b2d8897
feat(mcp): map request-scoped secrets to MCP HTTP/SSE headers (#5010)
* feat(mcp): map request-scoped secrets to HTTP/SSE headers

`user_auth` binds a credential to a configured DeerFlow user, so a caller
that picks the credential per request — a multi-tenant gateway, a per-run
API key, one shared MCP server fronting several environments — had to
register one MCP server entry per credential.

Add a declarative `mcpServers.<server>.headers_from_context` block mapping
HTTP header names to keys of the run request's `config.context.secrets`
carrier. A new built-in interceptor resolves the mapping on every tool call
and rewrites those headers, mirroring `user_scoped_auth`. The config file
stores names only, never a credential, so the Gateway returns the block
unmasked.

Registered after OAuth and `user_auth` in the interceptor chain: the later
interceptor runs closer to the transport, and the value chosen for this one
request is the most specific, so it wins. Fail-closed by default — a mapped
key missing from the request raises a `ToolException` naming only that key,
because falling back to the server's discovery credential would send one
tenant's call under another tenant's authority. `on_missing: "passthrough"`
opts out.

Durable background tasks are excluded: `McpTaskToolCaller` drives status and
cancel polls after the Agent run ends, where no run context exists, so the
fail-closed interceptor would deny every poll. Those calls keep using
server-level credentials, and a server declaring both `headers_from_context`
and `task_toolsets` now logs a warning.

Also corrects the custom-interceptor example in docs/MCP_SERVER.md (and the
matching claim in skills/AGENTS.md), which read request secrets from
`langgraph.config.get_config()["context"]`. That key is `None` inside a tool
call — the run context rides the LangGraph runtime, not the RunnableConfig
propagated to child runnables — so interceptors written from that example
never saw a value. The example now reads `request.runtime`, and
tests/test_mcp_context_headers.py pins LangGraph's runtime-injection rule by
driving a real langchain-mcp-adapters tool through a real graph with the
ambient-runtime fallback disabled.

Closes #5005

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* fix(mcp): resolve credential headers case-insensitively, carry them on durable submit

Review follow-ups on `headers_from_context`.

HTTP field names are case-insensitive, but every dict on the path to the wire
is not: `build_server_params` copies the operator's static `headers` spelling
verbatim, and langchain-mcp-adapters merges interceptor overrides into the
connection with a plain `{**connection_headers, **override_headers}` splat. A
static `authorization` and an injected `Authorization` therefore both reached
httpx as separate field lines, and a server reading the field with a
single-value accessor got the static discovery credential — inverting the
documented `headers` < `oauth` < `user_auth` < `headers_from_context`
precedence and running a per-request call under the shared credential.

Normalizing inside the interceptor cannot fix that on its own: the adapter
builds the request with `headers=None`, so an interceptor never sees the
connection's static headers and cannot displace them however it spells its own
key. A new `mcp/headers.py::apply_header_overrides` therefore drops any key
differing only in case and emits the spelling the connection already uses.
Applied to `headers_from_context`, `user_auth`, the OAuth interceptor, the
OAuth discovery-header write, and the durable-task connection merge, which all
carried the same collision. `headers_from_context.headers` now also rejects one
header mapped under two spellings at config load, in both the harness model and
the Gateway mirror.

Durable submit now carries the mapped headers, as docs/MCP_SERVER.md already
promised. `McpTaskToolCaller` disabled the interceptor for the whole caller, but
that caller serves submit as well as the polls, and submit is awaited inline
inside the Agent's tool call — where the run's LangGraph runtime is still the
ambient contextvar, so no secret has to be threaded through `TaskSubmitRequest`
or reach durable storage. The caller builds one chain and keeps a second view of
it without the context-headers interceptor; `call_tool` takes
`request_scoped_headers`, set only by `OrdinaryMcpTaskDriver.submit`. Status and
cancel keep server-level credentials, so background polls still cannot fail
closed, and the startup warning now describes the half it actually covers.

`_merge_preserving_secrets` restores masked extras inside `headers_from_context`
instead of writing the `***` sentinel back over the stored value, matching the
treatment `user_auth` extras and server-level extras already get; extras a PUT
omits carry over as well, while the declared mapping still replaces verbatim so
a round trip can remove an entry. `extra="allow"` plus name-based sensitivity
detection means the usual casualty is a name-valued key such as `tokenHeader`,
not only a credential.

The existing override test seeded the static header onto `request.headers`,
which production never does, so it modelled a merge that really happens one
layer down; the new tests drive a real adapter tool through a real connection
and assert on the headers the session is opened with, and the durable-submit
test runs through a real tool node with no runtime patching.

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* fix(mcp): reject case-insensitive duplicate static header names

* fix(mcp): preserve omitted headers_from_context fields on partial updates

---------

Co-authored-by: Claude Opus 5 <noreply@anthropic.com>
2026-08-27 10:42:42 +08:00
ajayr
7e95bef2e7
feat(mcp): per-user credential injection for shared MCP servers (#4868)
* feat(mcp): per-user credential injection for shared MCP servers

A single HTTP/SSE MCP server entry can now serve several users, each
authenticated to the remote service with their own credential. A server
opts in with a user_auth block mapping user ids to credential header
values ($ENV_VAR references supported):

  "user_auth": {
    "header": "Authorization",
    "users": { "<user-id>": "$SERVICE_TOKEN_ALICE" }
  }

The built-in user-scoped auth interceptor resolves the authenticated
runtime user on every tool call (request runtime -> ambient LangGraph
runtime -> auth config -> request-scoped user ContextVar) and rewrites
the configured header via request.override(), the same per-call
mechanism as the OAuth interceptor. It registers after OAuth in the
shared assembly so its per-user value wins the header when a server
declares both. The entry's static headers are used only for startup
tool discovery.

Fail-closed by default: an unmapped user - including the anonymous
default-user fallback - or a credential whose env reference resolved
empty gets an actionable ToolException instead of another user's
credential; on_missing: "passthrough" opts out per server. Combined
with the existing per-(user, thread) MCP session scoping this gives
credential isolation on shared servers.

Gateway API: user_auth.users values are masked in GET responses, and
PUT round-trips preserve stored credentials for masked values (same
contract as env/headers/oauth secrets); a masked value for a user id
not already stored is rejected.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(mcp): address review — preserve stored user_auth sub-fields on partial PUT, warn-and-skip stdio, allow extras

Review findings from #4868:

1. A partial user_auth payload (e.g. {"enabled": false}) merged to
   users={} and default on_missing, irreversibly wiping stored
   credentials on PUT. The merge is now sub-field-aware via
   model_fields_set — omitted sub-fields carry the stored values, an
   explicitly sent users map still replaces (so full-round-trip removal
   works), masked values still swap back for stored credentials.

2. user_auth on a stdio server was a silent no-op: rewritten headers go
   to call meta, never a transport header, while deny errors still fired.
   The interceptor builder now warns and skips non-sse/http servers,
   matching the tool_call_timeout transport-mismatch convention.

3. McpUserScopedAuthConfigResponse now allows extra keys like the
   harness-side model, and extras survive masking and merge, matching
   the server-level model_extra handling.

Adds four regression tests (partial-PUT preservation, explicit-map
replacement, extras round-trip, stdio warn-and-skip).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(mcp): reject blank user_auth.header at the gateway

A blank header passed the gateway response model, was persisted, then
failed the harness-side ExtensionsConfig validator on reload — the PUT
returned 500 after the write and every later config load/startup failed
until the file was hand-edited. Mirror the harness non-blank validator
on McpUserScopedAuthConfigResponse so the PUT fails with 422 before
anything is written.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* style: ruff format extensions_config.py

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(mcp): harden the trust chain and masking around user-scoped credential selection

Address review round 4:
- Scrub client-supplied user_id from run context/configurable for
  external callers in inject_authenticated_user_context, before every
  early return, and restamp only from request.state.user. Now that
  user_id selects which user's credential user-scoped MCP auth injects,
  a forged value must not survive any future path that skips the
  restamp. Internal callers (IM channels, scheduler) keep supplying
  end-user identity as before (PR #3294 contract). Regression tests pin
  both the scrub and that a forged body.context.user_id can never
  resolve as another user through merge + inject ordering.
- Include the caller's own resolved user id in the fail-closed deny
  message so operators can copy the exact users key (it differs by
  deployment path), and document the key formats in the mcp.mdx doc.
- Mask sensitive extra keys inside user_auth on GET like server-level
  extras, and swap masked sentinels back for stored values on PUT via
  _merge_extra_value_preserving_masked.
- Extract the interceptor wrap loop into compose_tool_interceptors and
  pin the security property functionally: an OAuth interceptor that
  actually sets Authorization loses the final header to the per-user
  credential through the same composition the session-pool path uses.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
2026-08-23 15:16:04 +08:00
Aari
236a068e77
fix(docker): let the Gateway write extensions_config.json in production (#4852)
* fix(docker): let the Gateway write extensions_config.json in production

AGENTS.md states extensions_config.json may be edited at runtime through the
Gateway API, and the Gateway implements that for the MCP enable switch,
PUT/PATCH /api/mcp/config and the skill update route. Two properties of the
production compose stack made every one of those writes fail:

- the file was mounted read-only, and
- Docker mounts it as its own mount point, so the temp-file-plus-rename in
  atomic_write_extensions_config hit EBUSY. Linux refuses rename() over a
  mount point whether or not the mount is writable, so making the mount
  read-write alone is not enough.

Mount it read-write and fall back to an in-place overwrite on EBUSY only.
The fallback is deliberately non-atomic and says so in a warning; it is
reached only where the atomic route cannot work, and any other errno still
propagates. config.yaml stays read-only: no API writes it.

docker-compose-dev.yaml mounts the whole project directory, so the
destination is an ordinary file there and this never surfaced in development.

* test(docker): parse mount options instead of matching a :ro suffix

Docker's short-syntax options segment is comma-separated, so a read-only
mount can legally be spelled ":ro,z" or ":z,ro" — common with SELinux
relabelling. Matching the raw string for a ":ro" suffix reads those as
writable, which silently defeats the guard: the writability assertion would
pass on a read-only mount, and the config.yaml assertion would fail on a
correctly read-only one.

Parse the options segment and test membership instead, and cover the parser
with the spellings that broke the suffix check.

* fix(config): harden mutable extensions config
2026-08-23 15:08:39 +08:00
Aari
47b258ebd7
feat(mcp): add ordinary durable task driver (#4690)
* feat(mcp): add durable task runtime foundation

* fix(chart): sync embedded config version

* fix(mcp): isolate task polls during shutdown

* feat(mcp): track consecutive poll errors on mcp_tasks

poll_attempt_count grows on every claim (successful polls included), so it
cannot drive a failure backoff without misjudging normal long tasks. Add
consecutive_poll_error_count: incremented when a claim is released after a
poll error, reset to zero by any applied snapshot. The backoff/terminal
policy that consumes it lands with the first concrete driver.

* fix(mcp): harden durable task lifecycle

* feat(mcp): add ordinary durable task driver

* test(mcp): address durable task review feedback

* fix(mcp): preserve submit tool descriptions

* fix(mcp): bound remote task calls

* fix(mcp): bound persisted task payloads

* fix(mcp): preserve task tool error details

* fix(mcp): enforce durable task boundaries

* test(mcp): cover task config snapshot lifecycle

---------

Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
2026-08-15 14:26:38 +08:00
lllyfff
99c926b7bb
fix(mcp): bring-up has no timeout and externalized tool outputs are counted as undelivered artifacts (#4657)
* fix: bound MCP server bring-up timeouts and exclude externalized tool outputs from delivery verification

Two related robustness fixes:

1. MCP server bring-up was unbounded. tool_call_timeout only covered
   session.call_tool(); tool discovery (subprocess spawn + initialize +
   tools/list) and persistent stdio session initialization could hang
   forever, blocking agent construction (and on the Gateway event loop,
   the whole process). Add a per-server session_init_timeout
   (default DEFAULT_MCP_SESSION_INIT_TIMEOUT = 60s, null disables) that
   bounds both discovery and pooled-session initialization. The session
   pool's existing cancellation handling tears down a session stuck
   mid-creation in its own task.

2. ToolOutputBudgetMiddleware externalizes oversized tool outputs into
   outputs/.tool-results/ (configurable tool_output.storage_subdir). The
   workspace-change scanner and run delivery verification counted those
   files as produced artifacts, so any run that externalized a tool output
   without also presenting a real artifact failed with
   "Artifact delivery incomplete". Exclude TOOL_RESULTS_DIRNAME via a
   shared constant (mirroring BROWSER_FRAMES_DIRNAME) and thread the
   configured storage_subdir through snapshot capture so both
   workspace-changes events and delivery verification stay clean.

* review: enforce single-segment tool_output.storage_subdir; document discovery-timeout cleanup

Address review feedback:

1. A custom tool_output.storage_subdir with a path separator (e.g.
   cache/tool-results) silently no-oped the workspace-scanner exclusion:
   os.walk yields one-segment dirnames, so a nested value never matched and
   its files were counted as produced artifacts again. ToolOutputConfig now
   validates storage_subdir as a single directory name (rejects separators,
   .., absolute, empty) with tests, so the exclusion is always sound.

2. The discovery-timeout path now documents why cancellation is safe, mirroring
   the session-init note: discovery runs inside the adapter's nested async
   context managers, and stdio_client's finally terminates the process tree
   (SIGTERM->SIGKILL on POSIX, process-tree on Windows), so a timed-out npx
   subprocess and its children are reaped rather than accumulating.

* review: log session-init timeouts and align API response model default with runtime config

Address second-round review feedback:

1. A session-init timeout raised TimeoutError without any log, unlike the
   discovery timeout which logs a WARNING. Wrap the bounded get_session in a
   try/except that logs the timeout (server name + seconds) and re-raises, so
   operators can diagnose tool-call failures caused by hung MCP sessions.

2. McpServerConfigResponse.session_init_timeout defaulted to None while
   McpServerConfig defaults to 60s: a server created via PUT /api/mcp/config
   without the field was persisted with null (no timeout) while the same
   server created in the config file got 60s. Align the response-model default
   to DEFAULT_MCP_SESSION_INIT_TIMEOUT so API-created and file-created servers
   behave the same; an explicit null still opts out.

* review: narrow the discovery-timeout handler to the bounded wait_for path

The except TimeoutError clause covered both the bounded wait_for branch and
the bare discovery branch. With session_init_timeout opted out (None), a
TimeoutError raised by discovery itself would hit the %.1f format with None:
logging raises TypeError internally, the WARNING is silently dropped, and a
--- Logging error --- traceback goes to stderr.

Narrow the handler to wrap only the wait_for call, where the branch condition
guarantees the timeout value is not None. A discovery-internal TimeoutError on
the opted-out path now falls through to the generic failure handler and is
reported as 'tool discovery failed' with exc_info. Covered by a regression
test that asserts the skip is reported without any broken format.
2026-08-05 08:56:18 +08:00
Felix Wang
e221bddb38
feat: support per-server MCP tool name prefixes (#4624)
* feat: support per-server MCP tool name prefixes

* refactor: pass MCP connection config directly

* fix: preserve unprefixed MCP tool names in session pool
2026-08-01 22:33:11 +08:00
Nan Gao
abe0dfd8fa
fix(mcp): constrain stdio launcher args and env at the config API (#4617)
* fix(mcp): constrain stdio launcher args and env at the config API

The API-managed stdio allowlist validated only `command`. Since `npx`/`uvx`
exist to fetch and run code, allowlisting the command name alone named a
binary without constraining what that binary ran, so the restriction did not
match the intent stated in `_validate_mcp_update_request`'s own docstring:
reducing the blast radius of a compromised authenticated browser session.

Screen two more fields on the stdio path, shared by `PUT /api/mcp/config` and
the enable branch of `PATCH`:

- `_ARBITRARY_EXEC_ARGS` rejects the flags that make a launcher evaluate a
  string (`-c`, `--call`, `-e`, `--eval`, `--print`, `--shell`, `--node-arg`,
  `--node-options`), matching `--flag=value` as well as `--flag value`, for
  every allowlisted command rather than just `npx`/`uvx`. `-p` is deliberately
  absent: it means `--package` for npx and `--python` for uv.
- `_CODE_INJECTING_ENV_VARS` rejects env names that inject code at process
  startup (`NODE_OPTIONS`, `LD_PRELOAD`, `PYTHONSTARTUP`, ...), which would
  otherwise sidestep the argument check.

Remote transports skip both -- they spawn nothing. Rejection messages echo
only the normalized flag, never the caller's value.

This is defense in depth, not a trust boundary: `npx`/`uvx` fetch and execute
remote packages by design, so an admin can still point one at a package they
published. Gateway admin remains equivalent to code execution on the host, and
the code, backend/AGENTS.md, and README all say so explicitly to keep the
check from being mistaken for a boundary.

`npx`/`uvx` stay in the default allowlist: nearly every official MCP server is
`npx -y @modelcontextprotocol/server-*`, so dropping them would break the
primary UI flow for adding one.

Tests cover each rejected flag spelling, case-insensitivity, `python -c` under
an extended allowlist, env injection, and the PATCH enable path, plus nine
positive cases pinning that real-world `npx`/`uvx`/`python -m` invocations
still validate.

* fix(mcp): screen PYTHONPATH and interpreter short-flag clusters

Review follow-up on the stdio launcher screen.

`PYTHONPATH` bypassed the env denylist on the *default* allowlist: `site`
imports `sitecustomize.py` from any `sys.path` entry before the tool's
entry point runs, so a caller-controlled directory is code execution
under plain `uvx` (verified against the real launcher). `PYTHONHOME` is
the same class via a repointed stdlib. Both are now rejected.
`PYTHONSTARTUP` is inert for non-interactive launchers and stays only as
belt-and-braces, now documented as such.

`-p` was exempted for every command, but it is node's `--print` --- the
long spelling was blocked while the short one passed once an operator
extended the allowlist. Whole-token matching also missed combined short
options (`node -pe`, `perl -we`, `python -Ic`). Both rules now apply to
commands outside `{npx, uvx}`, which are interpreters rather than package
runners; scoping them that way leaves the default allowlist unchanged,
since npx/uvx do not cluster short options and their trailing arguments
belong to a third-party server's own CLI where `-name` is ordinary.

`LD_LIBRARY_PATH`/`DYLD_LIBRARY_PATH` are recorded as an accepted
residual: conditional on the process loading a shadowable library, and
legitimately set by native-dependency servers.

Still defense in depth, not a trust boundary.

* docs(mcp): record NODE_PATH as an accepted search-path residual

Reviewer asked whether NODE_PATH belongs in _CODE_INJECTING_ENV_VARS for
parity with NODE_OPTIONS/PYTHONPATH. It does not, and the mechanism in the
report does not hold: verified on node v22, NODE_PATH is searched *after* the
local node_modules chain (the resolver unshifts the requiring module's paths
ahead of it), so it cannot shadow an installed dependency, and ESM import
ignores it entirely. It can only supply a CJS module that would otherwise
fail to resolve.

That puts it with LD_LIBRARY_PATH as a conditional search path, not with the
unconditional startup execution every entry in the set provides. Widen the
residual note from native-library shadowing to the general class, name
NODE_PATH in it, and pin the boundary with a test so it reads as a decision.

* fix(mcp): scope the stdio arg screen to the launcher's option region

`_arbitrary_exec_arg` inspected every element of `args`, justified by the claim
that the launchers in scope treat the token after `--` as a package name. That
is inaccurate: only the *first* token after `--` is the package name, and with
or without the separator every token from the package name onward is handed to
the third-party server's own argv, where `-c` is routinely "config" and `-e`
"env". So `npx -y @scope/server -c config.json` was rejected even though npm
never parses that `-c`, and the positive cases stayed green only because they
were picked to dodge the denylist. Over-blocking, not a bypass -- a regression
against the PR's own "the primary UI flow must keep working" goal.

Screen the launcher's own option region instead. Finding that region needs each
launcher's option *arity*, because a value is not a positional:
`npx -p <pkg> -c '<command>'` runs the command -- `-p` is `npm exec`'s
`--package` (it overrides the global `--parseable` shorthand), so `<pkg>` is
its value and npm keeps parsing its own flags. Ending the region at the first
non-flag token, the obvious rule, walks straight past that and turns an
over-block into a real eval bypass. The tables are therefore generated, not
guessed: `_NPX_BOOLEAN_ARGS` from `@npmcli/config` (npm 10.9.4) with the `-p`
override applied, `_UVX_VALUE_ARGS` from `uvx --help` (uv 0.11.1).

The unknown-option default is deliberately opposite per launcher, following the
exec set rather than symmetry. npx owns real exec flags, so an unknown option
consumes a value and keeps the region open; npm errors on options it does not
define, so that direction cannot reject an invocation that would otherwise
work. uvx owns no string-eval flag at all, so its screen is a tripwire rather
than a control, and an unknown option consumes nothing -- which keeps uv's
large and growing boolean surface from over-blocking. uvx also drops the short
spellings from its exec set, since `-c` is uv's `--constraints <file>`: an
ordinary documented option the old screen rejected outright.

Short options are matched case-sensitively now, because their case selects a
different option -- npm reads `-C` as `--prefix`, and folding it onto `-c`
rejected it. Long spellings stay case-insensitive: npm accepts `--CALL` and
runs it. Commands outside the package-launcher table are interpreters rather
than package runners and keep the unchanged whole-args screen, including the
`-p` rule and cluster decomposition.

Verified against the real launchers rather than by reading their docs. For
every argument vector in the new tests the validator's verdict matches whether
`npx` actually executes the string or passes it through to the server, and the
bypass-guard cases were confirmed to fail under the naive first-non-flag-token
boundary before being pinned.

Reported by @willem-bd on #4617. Two further false positives found while
confirming it are covered here: `uvx -c constraints.txt <tool>` above, and
`docker run -i --rm -e KEY <image>` -- the canonical GitHub MCP server
invocation -- which an operator who extends the allowlist with `docker` still
hits, since the conservative non-package-launcher path is unchanged.

---------

Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
2026-08-01 22:01:45 +08:00
Huixin615
133a82c6c2
fix: isolate MCP server toggles from invalid peer configs (#4577)
* fix: isolate MCP server toggle updates

* fix: write extensions config atomically

* fix: normalize MCP transport aliases
2026-07-31 08:32:39 +08:00
ly-wang19
4582a41347
fix(skills): offload blocking filesystem IO in update_skill and serialize writes (#3565)
* fix(skills): offload update_skill's blocking IO and share the config write lock

Re-applied on top of main rather than merged: update_skill has since gained
admin gating, user-scoped storage and a PUBLIC vs CUSTOM/LEGACY split, so the
offload is applied per path.

- PUBLIC: the extensions_config.json read-modify-write (path resolve, snapshot,
  merge, write, reload) moves to a worker thread via asyncio.to_thread. The
  payload is built from a snapshot so the cached singleton is never mutated in
  place while the write is still in flight.
- CUSTOM/LEGACY: set_skill_enabled_state is offloaded; the non-user-scoped
  fallback takes the same shared-file RMW path as PUBLIC.
- Both load_skills calls (and storage construction) are offloaded.

The RMW lock now lives next to reload_extensions_config as
get_extensions_config_write_lock() and is acquired by both the skills router and
the MCP router, which performs the same read-modify-write on the same file.
Previously each router held its own module-local lock, so once both sides
offloaded, a PUT /api/mcp/config could run inside a skill toggle's read->write
window and the later write would silently drop the other's change.

The lock is keyed by the running event loop rather than being a module-level
singleton: asyncio primitives bind to the first loop that awaits them, which
makes a plain module-level lock unusable in a process that runs more than one
loop.

Adds a cross-router regression anchor asserting a skill toggle and an MCP update
never overlap inside the RMW (max in-flight 1); it observes 2 when the routers
use separate locks.

* fix(config): own the extensions_config RMW lock from the worker thread

An asyncio.Lock held around `await asyncio.to_thread(...)` protects only the
awaiting task. If that task is cancelled the context manager releases the lock
immediately while Python keeps running the worker thread, so a second skills or
MCP writer could acquire it and operate on extensions_config.json concurrently
with the first worker — reopening the lost-update window this was meant to close.
The per-event-loop keying had a second hole: writers on different loops got
different locks and so did not exclude each other at all.

Replace it with a process-wide threading.Lock acquired *inside* the worker that
performs the RMW (`_write_extensions_skill_state` and `_apply_mcp_config_update`),
so ownership belongs to the thread doing the writing and is held until the write
and reload actually finish, regardless of what happens to the caller. A
threading.Lock also has no event-loop affinity.

Adds a cancellation regression: the skills worker is paused inside the lock, its
route task is cancelled, and the MCP writer is started — the MCP RMW must not
enter until the skills worker is released. Against the previous asyncio-lock
design this test fails with ['skills-enter', 'mcp-enter'].

The two existing serialization tests instrumented by replacing the worker
functions, which now bypasses the lock under test; they instead patch inside the
real workers (each module's reload_extensions_config, the last step under the
lock) so the production lock is exercised.

---------

Co-authored-by: ly-wang19 <ly-wang19@users.noreply.github.com>
Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
2026-07-29 18:52:32 +08:00
ly-wang19
289adcbb02
fix(mcp): offload blocking filesystem IO in MCP config update (#3552)
* fix(mcp): offload blocking filesystem IO in MCP config update

update_mcp_configuration resolved the extensions config path, probed its
existence, read the raw JSON, wrote the merged config, and reloaded it — all
blocking filesystem IO on the event loop (PUT /api/mcp/config). The whole
read-modify-write after the async admin check has no interleaved awaits, so it
moves into one _apply_mcp_config_update helper dispatched via asyncio.to_thread;
the masked response is built on the loop. The secret-preserving merge, error
codes, and the stdio command allowlist are unchanged.

Found via `make detect-blocking-io`. Same class as #3457 / #3529 / #3551.

Add tests/blocking_io/test_mcp_router.py anchor, verified red->green under the
strict Blockbuster gate.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(mcp): serialize concurrent config updates with a write lock

Address review on #3552: offloading the read-modify-write to a worker thread
dropped the implicit serialization the single-threaded event loop provided, so
two concurrent PUT /api/mcp/config calls could interleave and clobber each
other. Guard the offloaded RMW with a module-level asyncio.Lock to restore
within-process atomicity (cross-process writers remain a separate, pre-existing
concern).

Add a serialization regression test (red->green: without the lock the tracked
max concurrency exceeds 1).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix: address mcp config blocking io review

---------

Co-authored-by: ly-wang19 <ly-wang19@users.noreply.github.com>
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
2026-07-15 20:41:56 +08:00
Ryker_Feng
5ba25b06ec
feat(mcp): add MCP routing hints (#4004)
* feat: add MCP routing hints

* test: isolate mcp routing prompt config

* fix: address mcp routing review feedback
2026-07-09 16:26:31 +08:00
Nan Gao
2b301e8211
fix(channels): harden runtime credential management APIs (#3581)
* fix(channels): harden runtime credential management APIs

* fix(channels): address review feedback on credential hardening

Follow-up to the runtime credential-hardening pass, resolving five review
findings:

- WeChat auth persistence now writes through a 0o600 NamedTemporaryFile +
  Path.replace instead of write_text-then-chmod, so the iLink bot_token is
  never briefly readable at umask defaults (mirrors ChannelRuntimeConfigStore).
- The post-write chmod is split into its own try/except: a chmod failure on a
  filesystem without POSIX perms now logs at debug instead of masquerading as
  a "failed to persist" warning.
- Extracted the three near-identical _require_admin_user helpers (mcp,
  channel_connections, channels) into a single require_admin_user(request, *,
  detail) in app/gateway/deps.py; each router supplies its own detail string.
- Strengthened the runtime-config-store chmod coverage: a new test injects a
  temp-file chmod failure and asserts it is logged at debug while the
  destination is still owner-only (mutation-verified to fail if the chmod is
  dropped), plus a loose-pre-existing-file case.
- Removed the unused _FakeRepo from the blocking-io test: its isinstance gate
  routes through the repo-less 503 path, so neither stub was ever invoked.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
2026-06-18 10:45:33 +08:00
Huixin615
1896722e66
fix: add MCP tools cache reset endpoint (#3602)
* fix: add MCP tools cache reset endpoint

* docs: clarify MCP cache reset scope
2026-06-16 23:20:20 +08:00
greatmengqi
40a371b88c
fix(security): harden MCP config endpoint (#3425)
* fix(security): harden MCP config endpoint

* Potential fix for pull request finding

Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>

---------

Co-authored-by: greatmengqi <chenmengqi.0376@bytedance.com>
Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>
2026-06-08 12:21:02 +08:00
Eilen Shin
872079b894
docs: clean standalone LangGraph server remnants (#3301) 2026-05-29 11:36:45 +08:00
sunsine
7ec8d3a6e7
fix(security): mask sensitive values in MCP config API responses (#2667)
* fix(security): mask sensitive values in MCP config API responses

GET /api/mcp/config previously returned plaintext secrets including
env dict values (API keys), headers (auth tokens), and OAuth
client_secret/refresh_token. Any authenticated user could read all
MCP service credentials.

This commit masks sensitive fields in GET/PUT responses while
preserving the key structure so the frontend round-trip (GET masked
→ toggle enabled → PUT) correctly preserves existing secrets.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix(security): address Copilot review on MCP config masking

- Load raw JSON (un-resolved $VAR placeholders) as merge source instead
  of resolved config, preventing plaintext secrets from replacing
  $VAR placeholders on disk (Comment 2)
- Preserve all top-level keys (e.g. mcpInterceptors) in PUT, not just
  mcpServers/skills (Comment 1)
- Reject masked value '***' for new keys that don't exist in existing
  config, returning 400 with actionable error (Comment 3)
- Allow empty string '' to explicitly clear OAuth secrets, while None
  means 'preserve existing' for safe round-trip (Comment 4)
- Add 3 new tests for rejection, clearing, and edge cases (18 total)

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-05-21 10:28:57 +08:00
-Astraia-
191b60a326
fix: issue 1138 windows encoding (#1139)
* fix(windows): use utf-8 for text file operations

* fix(windows): normalize sandbox path masking

* fix(windows): preserve utf-8 handling after backend split
2026-03-16 16:53:12 +08:00
DanielWalnut
76803b826f
refactor: split backend into harness (deerflow.*) and app (app.*) (#1131)
* refactor: extract shared utils to break harness→app cross-layer imports

Move _validate_skill_frontmatter to src/skills/validation.py and
CONVERTIBLE_EXTENSIONS + convert_file_to_markdown to src/utils/file_conversion.py.
This eliminates the two reverse dependencies from client.py (harness layer)
into gateway/routers/ (app layer), preparing for the harness/app package split.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* refactor: split backend/src into harness (deerflow.*) and app (app.*)

Physically split the monolithic backend/src/ package into two layers:

- **Harness** (`packages/harness/deerflow/`): publishable agent framework
  package with import prefix `deerflow.*`. Contains agents, sandbox, tools,
  models, MCP, skills, config, and all core infrastructure.

- **App** (`app/`): unpublished application code with import prefix `app.*`.
  Contains gateway (FastAPI REST API) and channels (IM integrations).

Key changes:
- Move 13 harness modules to packages/harness/deerflow/ via git mv
- Move gateway + channels to app/ via git mv
- Rename all imports: src.* → deerflow.* (harness) / app.* (app layer)
- Set up uv workspace with deerflow-harness as workspace member
- Update langgraph.json, config.example.yaml, all scripts, Docker files
- Add build-system (hatchling) to harness pyproject.toml
- Add PYTHONPATH=. to gateway startup commands for app.* resolution
- Update ruff.toml with known-first-party for import sorting
- Update all documentation to reflect new directory structure

Boundary rule enforced: harness code never imports from app.
All 429 tests pass. Lint clean.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* chore: add harness→app boundary check test and update docs

Add test_harness_boundary.py that scans all Python files in
packages/harness/deerflow/ and fails if any `from app.*` or
`import app.*` statement is found. This enforces the architectural
rule that the harness layer never depends on the app layer.

Update CLAUDE.md to document the harness/app split architecture,
import conventions, and the boundary enforcement test.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* feat: add config versioning with auto-upgrade on startup

When config.example.yaml schema changes, developers' local config.yaml
files can silently become outdated. This adds a config_version field and
auto-upgrade mechanism so breaking changes (like src.* → deerflow.*
renames) are applied automatically before services start.

- Add config_version: 1 to config.example.yaml
- Add startup version check warning in AppConfig.from_file()
- Add scripts/config-upgrade.sh with migration registry for value replacements
- Add `make config-upgrade` target
- Auto-run config-upgrade in serve.sh and start-daemon.sh before starting services
- Add config error hints in service failure messages

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix comments

* fix: update src.* import in test_sandbox_tools_security to deerflow.*

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: handle empty config and search parent dirs for config.example.yaml

Address Copilot review comments on PR #1131:
- Guard against yaml.safe_load() returning None for empty config files
- Search parent directories for config.example.yaml instead of only
  looking next to config.yaml, fixing detection in common setups

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: correct skills root path depth and config_version type coercion

- loader.py: fix get_skills_root_path() to use 5 parent levels (was 3)
  after harness split, file lives at packages/harness/deerflow/skills/
  so parent×3 resolved to backend/packages/harness/ instead of backend/
- app_config.py: coerce config_version to int() before comparison in
  _check_config_version() to prevent TypeError when YAML stores value
  as string (e.g. config_version: "1")
- tests: add regression tests for both fixes

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix: update test imports from src.* to deerflow.*/app.* after harness refactor

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-14 22:55:52 +08:00