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25 Commits
| Author | SHA1 | Message | Date | |
|---|---|---|---|---|
Wenchao An
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e2f19d8335
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feat(plugins): full-stack plugin APIs and bookmarks (#5647)
* feat(plugins): add full-stack contributions and bookmarks example * ci(plugins): provision bookmark gateway for browser tests * fix(plugins): authenticate module downloads through configured backend * fix(plugins): isolate contributions and localize extension UI * fix(plugins): preserve bookmark agent routing and contain async callbacks * fix(plugins): pin durable batch workers to app extension snapshots |
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Dan Caldr
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19266a5eac
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fix(middlewares): end length-capped turns cleanly, prevent todo re-engagement, annotate write_file budget (#5569)
* fix(middlewares): end length-capped turns cleanly, prevent todo re-engagement, annotate write_file budget When a model hits its per-response output cap (finish_reason=length) while emitting a write_file tool call, ModelLengthFinishReasonMiddleware suppresses the truncated call and stamps model_length_termination. TodoMiddleware must not re-engage (jump_to=model) on such a capped turn -- doing so re-emits the same oversized call into the same cap, producing up to 3 futile responses with junk fragments instead of a clean truncation notice. Changes: - TodoMiddleware.after_model: skip completion reminder jump when additional_kwargs.model_length_termination is present (follows the existing deerflow_error_fallback precedent). - ModelLengthFinishReasonMiddleware: always append the length notice when tool calls were suppressed, even when partial text survived (collapses the visible-content ternary). Fixes a latent bug in append_visible_text that silently dropped string content. - tools.get_available_tools: annotate write_file's model-visible description with the model's configured max_tokens output budget. Guarded extraction safely handles missing or non-numeric tokens, and the tool is cloned via model_copy to keep module-level singletons immutable across assemblies and prevent guidance leakage to unbudgeted models. - release_policy_parameters() updated for both middlewares. - AGENTS.md chain entries (#20, #35) and module docstrings updated within AG002 guidance limits. - Tests: 8 new/focused unit tests + 1 updated pin + 1 real create_agent() integration test reproducing the incident (thread b1723286). * fix(tools): use effective model cap for write_file guidance --------- Co-authored-by: Willem Jiang <willem.jiang@gmail.com> |
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Wenchao An
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42334f26d7
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feat(capabilities): unify catalog, plugin configuration and agent selection (#5497)
* feat(capabilities): unify catalog, plugin configuration and agent selection * fix(capabilities): address review isolation, validation and demo issues * fix(capabilities): preserve concurrent selections and guide launcher repair |
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zhangwei-way
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b6503e9a35
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feat(knowledge): add per-message RAGFlow retrieval scope (#5238)
* feat(knowledge): integrate RAGFlow retrieval and management * test(knowledge): cover merged listing tool * feat(knowledge): add per-message retrieval scope * chore(docs): remove unrelated document * docs(knowledge): add interaction screenshots * feat(knowledge): simplify scope selector trigger * docs(knowledge): refresh selector screenshot * feat(knowledge): defer standalone management * docs(knowledge): show chat-only scope UI * fix(knowledge): honor scope on clarification replies * fix(knowledge): harden scoped replay validation * docs(knowledge): clarify replay scope precedence * fix(knowledge): keep provider settings on tools * fix(config): preserve tools-only knowledge settings * fix(knowledge): submit custom assistant identity * refactor(knowledge): trim PR scope changes * fix(knowledge): sanitize document scope display * feat(knowledge): enable scope selection in main chat * fix(knowledge): emphasize active scope icon without button frame * fix(knowledge): close context scrubbing and refresh e2e checks * fix(knowledge): preserve idempotent canonical retries * fix(knowledge): accept promptless conversation runs * style(knowledge): format backend regression tests * chore(knowledge): trim PR scope and fix frontend format * fix(knowledge): remove shared-scope notice * fix(knowledge): remove scope persistence notice * docs(knowledge): include main chat in catalog scope * fix(knowledge): preserve scope recovery and upgrades * fix(config): preserve LightRAG knowledge upgrades --------- Co-authored-by: foreleven <for-eleven@hotmail.com> |
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Totoro
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533e30e7f2
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[feat] add opt-in conversation reads for Gateway runs (#5399)
* feat: add scoped conversation reads to gateway runs * refactor: share conversation tool path and reuse parsed text --------- Co-authored-by: Totoro-qaq <279883115+Totoro-qaq@users.noreply.github.com> |
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Shxiao
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572744975d
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fix(tools): run tool assembly off-loop at async entry points (#5224)
* fix(tools): run tool assembly off-loop at async entry points get_available_tools() may block on MCP cache initialization while it is called on async agent-assembly paths (task_tool, durable batch execution), stalling the calling event loop for the full discovery duration. Dispatch the (unchanged, synchronous) assembly call to a worker thread via asyncio.to_thread at the two async entry points so the loop keeps processing requests, SSE frames, cancellations, and timers. Fixes #5172 * fix(tools): offload lead-agent assembly off-loop and pin with blocking-io anchors Review follow-up for #5224: - run_agent now dispatches agent_factory(...) through asyncio.to_thread, so lead-agent assembly (including both get_available_tools call sites in _assemble_lead_agent) runs off the event loop — the Gateway headline scenario from issue #5172. - _ensure_sync_invocable_tool takes a double-checked threading.Lock, making the in-place tool.func wrap on the shared tool singletons explicitly single-shot now that assembly can run concurrently on worker threads. - Add backend/tests/blocking_io/test_tool_assembly_offloop.py: blocking-probe anchors for task_tool and SubagentBatchService._execute_item under the strict Blockbuster gate, plus a meta-check proving the gate trips on the exact syscall class (ExtensionsConfig.from_file on the loop). Verified the anchor goes red when the offload is flattened back to a plain call. * fix(gateway): build checkpoint state accessor off-loop; anchor run_agent offload Review follow-up for #5224: - Add abuild_checkpoint_state_accessor (asyncio.to_thread around the unchanged sync builder) and switch every async call site to it: the stateless_wait route, thread_runs, both threads call sites, and the build_thread_checkpoint_state_accessor boundary. The agent-factory assembly re-enters get_available_tools() and may block on MCP cache initialization; repeat calls hit _state_accessor_graph_cache and only pay the thread hop. - Add a third blocking-io anchor driving the real run_agent with minimal RunManager/bridge stubs; the factory performs a real production blocking read (ExtensionsConfig.from_file()) and the test asserts assembly never runs on the main thread. Verified the anchor goes red when the run_agent offload is flattened back to a plain call. - Adapt the test_threads_router checkpoint-builder patch sites to the new async name. * refactor(tools): carry assembly offloads on a dedicated bounded pool Review follow-up for #5224: - Add utils/assembly_io.py: a dedicated ThreadPoolExecutor (default 8 workers, DEER_FLOW_ASSEMBLY_WORKERS-overridable, mirroring utils/file_io.py and tools/sync.py) with run_assembly(), which copies contextvars explicitly. A hung stdio MCP server parks its worker for the full MCP timeout; carrying assembly hops on the loop's default executor would let a few parked assemblies queue every other to_thread/run_in_executor(None, ...) caller behind them. - Switch all four offloads (run_agent, task_tool, batch _execute_item, abuild_checkpoint_state_accessor) to run_assembly(). - State the cold-path behavior in the accessor docstring: the graph cache validates factory identity, so non-identity-stable factories may duplicate lead-agent assembly across concurrent readers (MCP discovery stays process-wide single-flight); the pool bounds the duplicates. - Add a fourth blocking-io anchor driving build_thread_checkpoint_state_ accessor with a per-resolution fresh factory (always a cache miss) and the real production blocking read; enumerate all four offloads in the gate's module docstring. Verified the anchor goes red when abuild_checkpoint_state_accessor is flattened back to a plain call. * fix(subagents): revalidate batch item before launch; make assembly pool observable Review follow-up for #5224: - _execute_item() revalidates the durable state right after assembly and before executor.execute_async(): renew_item_lease() returns valid=False when cancel_batch() terminalized the item or the lease was lost while assembly was parked, and the launch is skipped (the canceller already finalized the item). Previously the launch was unconditional and the poll loop's cancellation checks only started after execution began. - Regression test driving the real SQLite repository: a blocking assembly probe parks _execute_item, cancel_batch() lands, and the launch is skipped with the item staying cancelled. Verified the test goes red when the revalidation is removed. - run_assembly() tracks pending assemblies and logs a throttled WARNING once the pending count exceeds the worker count, so assembly starvation (workers parked on a hung MCP server) is distinguishable from idle. - The run_agent blocking-io anchor now binds a sentinel extension snapshot via ctx.extensions and asserts the factory observed it through get_agent_build_extensions(), pinning run_assembly()'s ContextVar propagation. Verified red when ctx.run is dropped. - Document the assembly pool in backend/AGENTS.md. * fix(utils): decrement the assembly pending count on the pool thread The pending-assembly counter behind the starvation warning decremented from the asyncio future's done callback, which never fires once the submitting loop is closed while its worker is still running: the count ratcheted up permanently and eventually fired the starvation warning with no starvation behind it (reproduced at 97dc9bec by review). Decrement instead from the dispatched work item: run_assembly() wraps func so a finally drops the count under the pending lock on the pool thread, and the done callback is gone. Pin the counter with tests/test_assembly_io.py: a healthy call returns the count to zero, and an abandoned loop (stopped while the worker is parked) does not wedge it — the abandoned case goes red against the old done-callback decrement. * docs(utils): fix the pending-counter comment after the decrement move The comment still described the removed done-callback decrement, contradicting _work()'s own comment; state the actual mechanism (increment on the loop before dispatch, decrement from the dispatched work item's finally on a pool thread). * test(gateway): retarget checkpoint-accessor stubs to the services seam thread_runs and runs now call abuild_checkpoint_state_accessor, so the upstream wait-reader, regenerate-prepare, and idempotency tests must stub the sync builder where abuild resolves it (app.gateway.services); stubbing the removed router re-exports fails with AttributeError at setup. The async seam semantics are unchanged: run_assembly invokes the stubbed sync builder off-loop and propagates its return values and exceptions. Move the agent/tool assembly off-load note from backend/AGENTS.md to deerflow/utils/AGENTS.md (next to assembly_io.py) so the effective instruction chain for agents/middlewares no longer grows past the AG002 hard limit. * fix(runtime): serialize same-key accessor assembly and release queued-cancel slots Address the three review follow-ups on the assembly off-load: - assembly_io: a job cancelled while still queued never runs its work item, so the dispatched finally never fired and _pending_assemblies stayed elevated until a false starvation warning. Exactly-once cleanup now rides the concurrent future's cancelled() state — cancel() only succeeds before the executor starts the item, so cancelled() is true precisely when the finally will never run — plus a submit-failure release; the one-worker queued-cancellation case is pinned red/green. - services: overlapping cold readers sharing one cache key could both run full agent assembly. _state_accessor_graph now serializes per key through a thread-side KeyedLockTable (pool threads, no running loop) and re-validates factory/app-config identity under the lock, so the factory runs exactly once while identity changes still rebuild. Cache dict access is lock-guarded now that construction runs off-loop. - guidance inventory: register deerflow/utils/AGENTS.md in EXPECTED_GUIDANCE_PATHS so test_repository_has_the_approved_scoped_ guidance_shape matches the relocated assembly note (CI shard 4). * test(keyed-lock): pin KeyedLockTable reclamation and waiter bypass directly Thread-side counterparts of the async table's own tests: overlapping hold() calls serialize (a late arrival joins the live entry instead of creating a second lock that bypasses a queued waiter), the last check-in pops the entry, and many unique keys leave the registry empty. Both regressions verified red — popping unconditionally trips the late-arrival test, never reclaiming trips the many-keys test. --------- Co-authored-by: Willem Jiang <willem.jiang@gmail.com> |
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PeaceMaker-best
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fb28ed0122
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feat(subagents): enable historical upload discovery (#5170)
Signed-off-by: PeaceMaker-best <221849497+PeaceMaker-best@users.noreply.github.com> Co-authored-by: PeaceMaker-best <221849497+PeaceMaker-best@users.noreply.github.com> |
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Aari
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ff0a6768c2
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feat(subagents): add unified capacity and durable batch execution (#4998)
* feat(subagents): add capacity controls and durable batches * fix(helm): sync subagent config schema version * fix(subagents): preserve batch history without worker * fix(subagents): support explicit factory runtimes * fix: address durable batch review findings |
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Aari
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5ffc2d3e27
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feat(mcp): complete durable task notifications and chat UI (#4833)
* feat(mcp): add reliable task notifications and cancellation * feat(mcp): add background task chat UI * fix(mcp): hide and sanitize task notification prompts * fix(mcp): sanitize projected task names * fix(mcp): harden task notifications and details * fix(mcp): harden task lifecycle recovery * fix(mcp): gate task UI and isolate cancellations * test: scope plain-text response locator * fix(mcp): align task notification boundaries * fix(mcp): bound task delivery retries * fix background task notification races |
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Lee minjing
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e225ad57d7
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feat(uploads): lazy-load historical files via list_uploaded_files tool (#4174)
* feat(uploads): lazy-load historical files via list_uploaded_files tool
Replace per-turn injection of all historical upload metadata with on-demand
discovery via a new `list_uploaded_files` built-in tool, following the same
deferred-discovery pattern used by skills.
- Rename <uploaded_files> block to <current_uploads> (current-run files only)
- Add list_uploaded_files tool with include_outline: bool|list[str]
- Extract outline helpers to shared deerflow/utils/file_outline.py
- Update system prompt to reflect lazy-loading behaviour
- Historical file scan removed from UploadsMiddleware.before_agent()
Co-Authored-By: Claude <noreply@anthropic.com>
* fix(uploads): clear uploaded_files state when no new files in current turn
When before_agent() returns None on empty turns, the LastValue
uploaded_files field retains the previous turn's filenames.
list_uploaded_files then incorrectly excludes those files as
"current-run" files, making them invisible until the next upload.
Fix: return {"uploaded_files": []} instead of None to explicitly
clear state. Add two-turn regression test covering the exact
scenario from review feedback.
Co-Authored-By: Claude <noreply@anthropic.com>
* fix: resolve CI lint errors and stale test assertion from merge
- Split long prompt line to fit 240-char limit
- Add missing `Any` import in list_uploaded_files_tool
- Remove unused `re` import in file_conversion (outline code moved)
- Remove unused `os` import in middleware test
- Fix test assertion: <uploaded_files> → <current_uploads> after main merge
Co-Authored-By: Claude <noreply@anthropic.com>
* fix: resolve CI lint errors and stale test assertion from merge
- Split long prompt line to fit 240-char limit
- Add missing `Any` import in list_uploaded_files_tool
- Remove unused `re` import in file_conversion (outline code moved)
- Remove unused `os` import in middleware test
- Fix test assertion: <uploaded_files> → <current_uploads> after main merge
Co-Authored-By: Claude <noreply@anthropic.com>
* fix: add current_uploads to input sanitization exempt tags
The lazy-loading PR renamed <uploaded_files> to <current_uploads>.
The anti-drift guard scans all framework XML blocks and requires each
to be either blocked or explicitly exempted. current_uploads wraps
trusted server-generated file metadata, not user input, so it belongs
in the exempt set.
Co-Authored-By: Claude <noreply@anthropic.com>
* test: regenerate replay golden after uploaded_files state change
before_agent now returns {"uploaded_files": []} instead of None,
adding uploaded_files to SSE values events. Regenerated via
DEERFLOW_WRITE_GOLDEN=1.
Co-Authored-By: Claude <noreply@anthropic.com>
* fix: review feedback — memory pipeline, stale tags, state clearing, nits
- Match both tags in memory stripping pipeline (uploaded_files|current_uploads)
- Remove stale uploaded_files from _BLOCKED_TAG_NAMES
- Clear uploaded_files on all before_agent early-return paths
- Fix ponytail: stray word in file_conversion re-export comment
- Remove dead total_omitted branch in _format_omitted_summary
- ruff format fixes
Co-Authored-By: Claude <noreply@anthropic.com>
* fix: block current_uploads, sanitize only original user content
Per review feedback: instead of exempting <current_uploads> (which
allows user forgery), move it to _BLOCKED_TAG_NAMES and change
InputSanitizationMiddleware._process_request to scan only the
original user content (ORIGINAL_USER_CONTENT_KEY) when available.
Server-injected trusted blocks are no longer checked against the
blocked-tag denylist.
Co-Authored-By: Claude <noreply@anthropic.com>
* docs: clarify fallback reason in input sanitization comment
Co-Authored-By: Claude <noreply@anthropic.com>
* @
fix: third-round review feedback — state visibility, sanitization, regex, nits
- list_uploaded_files_tool: logger.warning instead of silent try/except
on runtime.state read failure (High)
- input_sanitization_middleware: _extract_text_from_content skips empty
text blocks to match message_content_to_text behaviour; rfind fallback
path logs warning for observability (Medium)
- memory pipeline regexes: backreference (?P<tag>)(?P=tag) in
message_processing.py and prompt.py (Low)
- file_conversion.py: re-export moved to top of file (Low)
- Tests: middleware→tool state bridge test; integrated forged-tag +
multimodal sanitization tests
PR #4174 — Follow-up issues: #4212, #4213, #4214
Co-Authored-By: Claude <noreply@anthropic.com>
@
* @
fix: 4th-round review — denylist, sanitization, scandir, nits
- Add "uploaded_files" back to _BLOCKED_TAG_NAMES (old tag still processed by
deermem; user forgery must be escaped) (consistency)
- Fix inaccurate rfind-fallback comment: UploadsMiddleware keeps string as
string, fallback is unreachable for strings (doc fix)
- Distinguish "empty string key" (upload without text) from "non-string key"
(caller forgery) so empty-text uploads never escape the server block (edge)
- Merge dual os.scandir(uploads_dir) calls into one list re-use (minor)
- Add comment on .md sibling skip known limitation: user-uploaded .md files
whose stem collides with a converted doc are hidden (boundary, no code change)
Co-Authored-By: Claude <noreply@anthropic.com>
@
* @
fix: tighten rfind-failure fallback — distinguish server blocks from user blocks
When _extract_text_from_content and message_content_to_text disagree on
multimodal list content and rfind fails, use content[0] (server-injected
<current_uploads> block) vs content[1:] (user blocks) to sanitize only
user blocks. Raw strings and non-standard dict blocks that
_extract_text_from_content misses are now also sanitized.
Non-distinguishable paths (< 2 text blocks, non-list content) still
degrade to full sanitization (safe — server block may be escaped but
user forgery never leaks). All fallback paths log via logger.warning.
Decision 18 / willem-bd 4th-round comment #3
Co-Authored-By: Claude <noreply@anthropic.com>
@
* @
fix: correct comments referencing text_blocks → content in rfind fallback
Co-Authored-By: Claude <noreply@anthropic.com>
@
* fix: 5th-round review — dead code, subagent gating, integration test, perf, consistency
- Delete unreachable ORIGINAL_USER_CONTENT_KEY guard in rfind fallback
branch (original_user_content guaranteed non-empty str at that point)
- Remove list_uploaded_files from BUILTIN_TOOLS; add include_upload_tool
param to get_available_tools(), default True; task_tool.py passes False
so subagents no longer receive a tool whose state exclusion is broken
- Add integration test exercising real create_agent graph (not mocked
runtime.state) to verify LangGraph propagates before_agent state writes
into ToolRuntime.state during same-turn tool calls
- Cache DirEntry.stat() st_size in candidates tuple to avoid second
per-file syscall in the rendering loop
- Make the upload-tag pre-check case-insensitive (content_str.lower())
to match _UPLOAD_BLOCK_RE re.IGNORECASE
PR #4174 — willem-bd 5th-round review items #1-#5
Co-Authored-By: Claude <noreply@anthropic.com>
* fix(channels): pass files metadata through _human_input_message() for IM uploads
_human_input_message() was not passing additional_kwargs.files to the
downstream message. UploadsMiddleware read no files, wrote
uploaded_files=[], and list_uploaded_files reported same-run IM
attachments as historical files (fancyboi999 repro).
Fix: add files parameter to _human_input_message(), call site passes
files=uploaded. Regression test locks the contract.
Co-Authored-By: Claude <noreply@anthropic.com>
* fix(channels): remove legacy <uploaded_files> manual prepend to fix double-injection regression
Commit 8d86dbf6 added files= pass-through to UploadsMiddleware but
left the manual _format_uploaded_files_block() prepend in place.
Every IM attachment reached the model twice — once via the legacy
<uploaded_files> block and once via <current_uploads>.
This commit removes the manual prepend and the now-dead
_format_uploaded_files_block() function. UploadsMiddleware is the
sole upload-context producer for both IM and web paths.
Reported-by: fancyboi999 (PR review)
Co-Authored-By: Claude <noreply@anthropic.com>
* docs: update #4212 issue body to reflect completed fixes and narrowed remaining scope
* chore: remove temporary scratch file
* fix(middleware): neutralize user-derived values inside <current_uploads> block
Upload-derived filenames, paths, outline titles, and preview text are
interpolated verbatim inside the trusted <current_uploads> wrapper,
which InputSanitizationMiddleware exempts from sanitization. A crafted
filename or document heading containing blocked authority tags would
bypass the guardrail and enter model context as trusted framework data.
Fix: call neutralize_untrusted_tags() on all four user-derived values
inside _format_file_entry(), preserving the outer <current_uploads>
wrapper untouched.
Reported-by: fancyboi999 (P1 security review)
Co-Authored-By: Claude <noreply@anthropic.com>
* fix(middleware): neutralize extension labels in omitted-file summary
Files exceeding the 10-item context cap bypass _format_file_entry().
Their extensions, derived from user-controlled filenames via
_extension_label(), were interpolated verbatim into the trusted
<current_uploads> wrapper — another path for blocked authority tags
to escape the guardrail.
Fix: neutralize extension values inside _extension_label(), the
single extraction point for all extension labels.
Reported-by: fancyboi999 (P1 security review)
Co-Authored-By: Claude <noreply@anthropic.com>
* fix(tools): neutralize user-derived values in list_uploaded_files tool result
Apply neutralize_untrusted_tags() to every model-visible user-derived value
returned by list_uploaded_files: filename, virtual path, extension, outline
titles, outline preview lines, and omitted-file extension summary.
This closes the last remaining injection bypass in the upload lazy-loading
path - the <current_uploads> block and its omitted summary were already
neutralized (previous commits), but the list_uploaded_files tool produced
a second exit for the same attacker-controlled metadata that
ToolResultSanitizationMiddleware did not cover.
Co-Authored-By: Claude <noreply@anthropic.com>
* fix(tests): add missing include_upload_tool=False to task_tool mock assertions
PR #4174 added include_upload_tool parameter to get_available_tools().
task_tool.py correctly passes include_upload_tool=False for subagents
but 5 existing tests' assert_called_once_with expectations were not
updated, causing CI failures.
Co-Authored-By: Claude <noreply@anthropic.com>
---------
Co-authored-by: Claude <noreply@anthropic.com>
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Huixin615
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f9340c1f08
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test(mcp): cover passive skill tool visibility (#4247)
* test(mcp): cover passive skill tool visibility * test(mcp): tighten deferred discovery coverage |
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Ryker_Feng
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41658c5ff4
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feat(skills): add skill review quality gate (#4037)
* feat(skills): add skill review quality gate * fix(skills): skip review eval fixtures in CI * fix(skills): ignore review eval fixtures in bundled scans * fix(skill-review): harden review gate boundaries * fix(skills): address skill review gate feedback |
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AochenShen99
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2bbc7879fa
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refactor(tool-search): consolidate MCP metadata tag and harden deferred-tool setup (#3370)
Follow-up to #3342 (deferred MCP tool loading). Maintainability cleanup plus hardening of malformed/empty tool_search queries; no change to the deferral mechanism or search ranking. - Add deerflow/tools/mcp_metadata.py as the single source of truth for the "deerflow_mcp" tag (MCP_TOOL_METADATA_KEY + tag_mcp_tool + public is_mcp_tool). Removes the duplicated magic string and the private, cross-module _is_mcp_tool import. - tool_search.search: never raise on model-generated input. Extract _compile_catalog_regex (shared compile-with-literal-fallback); return empty for empty/whitespace queries and a bare "+" instead of matching everything or raising IndexError. - DeferredToolSetup: document the empty-vs-populated invariant. - build_deferred_tool_setup: comment the two distinct empty-return branches. - _assemble_deferred: add return type, rename local to deferred_setup, build the final list with an explicit append. - Tests: use tag_mcp_tool instead of per-file tag helpers; cover empty and bare-"+" queries. |
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AochenShen99
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d9f4724950
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fix(tool-search): reliably hide deferred MCP schemas by removing the ContextVar (closures + graph state) (#3342)
* feat(tool-search): add hash-scoped promoted state to ThreadState * feat(tool-search): add immutable DeferredToolCatalog with stable hash * feat(tool-search): add build_deferred_tool_setup + Command-writing tool_search * refactor(tool-search): replace deferred-tool ContextVar with closures + graph state (#3272) Build the deferred catalog + tool_search tool per agent from the policy-filtered tool list (after skill allowed-tools), pass deferred_names + catalog_hash explicitly to DeferredToolFilterMiddleware and the prompt, and record promotions in ThreadState.promoted (scoped by catalog_hash) via a Command-returning tool_search. Removes DeferredToolRegistry and the _registry_var ContextVar so deferral no longer depends on build/execute sharing an async context. MCP tools are tagged with metadata[deerflow_mcp]; client.py assembles deferral the same way. Catalog is built AFTER tool-policy filtering (no policy-excluded tool can leak via tool_search) and assembly is fail-closed. Migrate tests off the deleted registry APIs; delete the obsolete ContextVar-based #2884 regression (re-covered by state-based tests in a follow-up). * test(tool-search): lock tool_search promotion into next model turn via graph state * test(tool-search): cross-context, policy-leak, fail-closed, #2884 isolation regressions * test(tool-search): align real-LLM e2e with closure-based deferred setup * docs: update DeferredToolFilterMiddleware description for closure+state design * style(tests): drop unused import in test_deferred_setup (ruff) * test(tool-search): harden merge_promoted + replace tautological catalog test From independent code review: - merge_promoted: use existing.get("catalog_hash") so a forward-incompatible or externally-injected persisted promoted dict triggers a replace instead of a KeyError crash; add regression test for the malformed-existing case. - test_deferred_catalog: replace the `== [] or True` tautology (a test that could never fail) with a deterministic invalid-regex->literal-fallback check (positive match on calc + negative empty match). - DeferredToolCatalog: comment why frozen-without-slots is required for the cached_property hash/names fields (adding slots=True would break them). * fix(tool-search): read tool_search.enabled from self._app_config in client DeerFlowClient._ensure_agent called get_app_config() directly to read tool_search.enabled, but the client already resolves and stores its config as self._app_config at construction (and uses it everywhere else). The bare call re-resolves config from disk at agent-build time, which raises FileNotFoundError in environments without a config.yaml (CI) — test_client.py's fixture only patches get_app_config during __init__, so the later call hit the real loader. Use self._app_config, matching the rest of the client. * test(tool-search): lock tool_search post-policy append ordering tool_search is appended after skill-allowlist filtering, so the allowlist can no longer deny it by name. Lock the intended contract: it only appears when allowed MCP tools survive the filter, and its catalog (derived from the already policy-filtered list) can never expose a denied tool. Addresses the ordering observation from the Copilot review on #3342. |
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AochenShen99
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3599b570a9
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fix(harness): wrap all async-only tools for sync clients (#2935) | ||
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Xinmin Zeng
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f1a0ab699a
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fix(tools): preserve tool_search promotions across re-entrant get_available_tools (#2885)
* fix(tools): preserve tool_search promotions across re-entrant get_available_tools Closes #2884. ``get_available_tools`` used to unconditionally call ``reset_deferred_registry()`` and rebuild a fresh ``DeferredToolRegistry`` on every invocation. That works for the first call of a request (the ContextVar starts at its default of ``None``), but any RE-ENTRANT call during the same async context — e.g. ``task_tool`` building a subagent's toolset, or a custom middleware that rebuilds tools mid-run — wiped any ``tool_search`` promotions the parent agent had already made. The ``DeferredToolFilterMiddleware`` would then re-hide those tools from the next model call, leaving the agent able to see a tool's name (via the prior ``tool_search`` result that's still in conversation history) but unable to invoke it. Fix: when the ContextVar already holds a registry, reuse it instead of rebuilding. Fresh requests still get a fresh registry because each new graph run starts in a new asyncio task with the ContextVar at ``None``. ## Verification - Unit-level reproduction (``test_get_available_tools_resets_registry_wiping_promotion``): promote a tool in the registry, call ``get_available_tools`` again, assert the promotion is preserved. Fails on main, passes on this branch. - Graph-execution reproduction (two tests): drive a real ``langchain.agents.create_agent`` graph with the real ``DeferredToolFilterMiddleware`` through two model turns, including one that issues a re-entrant ``get_available_tools`` call to simulate the task_tool subagent path. - Real-LLM end-to-end (``test_deferred_tool_promotion_real_llm.py``, opt-in via ``ONEAPI_E2E=1``): drives the same flow against a real OpenAI-compatible model (verified on GPT-5.4-mini through the one-api gateway), watches the model call the promoted ``fake_calculator`` through the deferred-filter middleware, and asserts the right arithmetic result. Passes against the fixed branch. - Companion update to ``test_tool_deduplication.py``: dropped the ``@patch("deerflow.tools.tools.reset_deferred_registry")`` decorators because the symbol is no longer imported there. - Test fixtures in the new files patch ``deerflow.tools.tools.get_app_config`` with a minimal ``model_construct``-ed ``AppConfig`` instead of calling the real loader, so they never trigger ``_apply_singleton_configs`` and never leak ``_memory_config``/``_title_config``/… mutations into the rest of the suite. Full backend suite: 3208 passed / 14 skipped / 0 failed. ruff check + format clean. * fix(tools): address Copilot review on #2885 - tools.py: rewrite the reuse-path comment to spell out (a) why we don't reconcile the registry against the current ``mcp_tools`` snapshot — the MCP cache doesn't refresh mid-graph-run, the lead agent's ``ToolNode`` is already bound to the previous tool set anyway, and ``promote()`` drops the entry so a naive re-sync misclassifies promotions as new tools — and (b) why the log uses ``max(0, …)`` to avoid negative counts when the cache shrinks between snapshots. - Replace direct ``ts_mod._registry_var.set(None)`` in test fixtures with the public ``reset_deferred_registry()`` helper so tests don't couple to module internals. - Correct the docstring path in ``test_deferred_tool_registry_promotion.py`` to match the actual monkeypatch target (``deerflow.mcp.cache.get_cached_mcp_tools``). - Rename ``test_get_available_tools_resets_registry_wiping_promotion`` to ``test_get_available_tools_preserves_promotions_across_reentrant_calls`` so the test name describes the contract being asserted, not the bug it originally reproduced. Full backend suite: 3208 passed / 14 skipped. Real-LLM e2e: 1 passed. |
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AochenShen99
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bedbf2291e
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fix(harness): wrap async-only config tools for sync client execution (#2878)
* fix(harness): wrap async-only config tools for sync clients * refactor(tools): share async tool sync wrapper |
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greatmengqi
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8ba01dfd83
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refactor: thread app_config through lead and subagent task path (#2666)
* refactor: thread app config through lead prompt * fix: honor explicit app config across runtime paths * style: format subagent executor tests * fix: thread resolved app config and guard subagents-only fallback Address two PR review findings: 1. _create_summarization_middleware passed the original (possibly None) app_config into create_chat_model, forcing the model factory back to ambient get_app_config() and risking config drift between the middleware's resolved view and the model's view. Pass the resolved AppConfig instance through end-to-end. 2. get_available_subagent_names accepted Any-typed config and forwarded it to is_host_bash_allowed, which reads ``.sandbox``. A SubagentsAppConfig (also accepted upstream as a sum-type input) has no ``.sandbox`` attribute and would be silently treated as "no sandbox configured", incorrectly disabling the bash subagent. Guard on hasattr and fall back to ambient lookup otherwise. Adds regression tests for both paths. * chore: simplify hasattr guard and tighten regression tests - Collapse if/else into ternary in get_available_subagent_names; hasattr(None, ...) is False so the explicit None check was redundant. - Drop comments that narrate the change rather than explain non-obvious WHY (test names already convey intent). - Replace stringly-typed sentinel "no-arg" in regression test with direct args tuple comparison. --------- Co-authored-by: greatmengqi <chenmengqi.0376@bytedance.com> |
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greatmengqi
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e82940c03d
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refactor: thread release config through lead path (#2612)
Co-authored-by: greatmengqi <chenmengqi.0376@bytedance.com> |
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Ansel
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6dce26a52e
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fix: resolve tool duplication and skill parser YAML inconsistencies (#1803) (#2107)
* Refactor tests for SKILL.md parser Updated tests for SKILL.md parser to handle quoted names and descriptions correctly. Added new tests for parsing plain and single-quoted names, and ensured multi-line descriptions are processed properly. * Implement tool name validation and deduplication Add tool name mismatch warning and deduplication logic * Refactor skill file parsing and error handling * Add tests for tool name deduplication Added tests for tool name deduplication in get_available_tools(). Ensured that duplicates are not returned, the first occurrence is kept, and warnings are logged for skipped duplicates. * Apply suggestions from code review Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> * Update minimal config to include tools list * Update test for nonexistent skill file Ensure the test for nonexistent files checks for None. * Refactor tool loading and add skill management support Refactor tool loading logic to include skill management tools based on configuration and clean up comments. * Enhance code comments for tool loading logic Added comments to clarify the purpose of various code sections related to tool loading and configuration. * Fix assertion for duplicate tool name warning * Fix indentation issues in tools.py * Fix the lint error of test_tool_deduplication * Fix the lint error of tools.py * Fix the lint error * Fix the lint error * make format --------- Co-authored-by: Willem Jiang <willem.jiang@gmail.com> Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> |
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DanielWalnut
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888f7bfb9d
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Implement skill self-evolution and skill_manage flow (#1874)
* chore: ignore .worktrees directory * Add skill_manage self-evolution flow * Fix CI regressions for skill_manage * Address PR review feedback for skill evolution * fix(skill-evolution): preserve history on delete * fix(skill-evolution): tighten scanner fallbacks * docs: add skill_manage e2e evidence screenshot * fix(skill-manage): avoid blocking fs ops in session runtime --------- Co-authored-by: Willem Jiang <willem.jiang@gmail.com> |
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13ernkastel
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92c7a20cb7
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[Security] Address critical host-shell escape in LocalSandboxProvider (#1547)
* fix(security): disable host bash by default in local sandbox * fix(security): address review feedback for local bash hardening * fix(ci): sort live test imports for lint * style: apply backend formatter --------- Co-authored-by: Willem Jiang <willem.jiang@gmail.com> |
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DanielWalnut
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d119214fee
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feat(harness): integration ACP agent tool (#1344)
* refactor: extract shared utils to break harness→app cross-layer imports Move _validate_skill_frontmatter to src/skills/validation.py and CONVERTIBLE_EXTENSIONS + convert_file_to_markdown to src/utils/file_conversion.py. This eliminates the two reverse dependencies from client.py (harness layer) into gateway/routers/ (app layer), preparing for the harness/app package split. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * refactor: split backend/src into harness (deerflow.*) and app (app.*) Physically split the monolithic backend/src/ package into two layers: - **Harness** (`packages/harness/deerflow/`): publishable agent framework package with import prefix `deerflow.*`. Contains agents, sandbox, tools, models, MCP, skills, config, and all core infrastructure. - **App** (`app/`): unpublished application code with import prefix `app.*`. Contains gateway (FastAPI REST API) and channels (IM integrations). Key changes: - Move 13 harness modules to packages/harness/deerflow/ via git mv - Move gateway + channels to app/ via git mv - Rename all imports: src.* → deerflow.* (harness) / app.* (app layer) - Set up uv workspace with deerflow-harness as workspace member - Update langgraph.json, config.example.yaml, all scripts, Docker files - Add build-system (hatchling) to harness pyproject.toml - Add PYTHONPATH=. to gateway startup commands for app.* resolution - Update ruff.toml with known-first-party for import sorting - Update all documentation to reflect new directory structure Boundary rule enforced: harness code never imports from app. All 429 tests pass. Lint clean. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * chore: add harness→app boundary check test and update docs Add test_harness_boundary.py that scans all Python files in packages/harness/deerflow/ and fails if any `from app.*` or `import app.*` statement is found. This enforces the architectural rule that the harness layer never depends on the app layer. Update CLAUDE.md to document the harness/app split architecture, import conventions, and the boundary enforcement test. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * feat: add config versioning with auto-upgrade on startup When config.example.yaml schema changes, developers' local config.yaml files can silently become outdated. This adds a config_version field and auto-upgrade mechanism so breaking changes (like src.* → deerflow.* renames) are applied automatically before services start. - Add config_version: 1 to config.example.yaml - Add startup version check warning in AppConfig.from_file() - Add scripts/config-upgrade.sh with migration registry for value replacements - Add `make config-upgrade` target - Auto-run config-upgrade in serve.sh and start-daemon.sh before starting services - Add config error hints in service failure messages Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix comments * fix: update src.* import in test_sandbox_tools_security to deerflow.* Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix: handle empty config and search parent dirs for config.example.yaml Address Copilot review comments on PR #1131: - Guard against yaml.safe_load() returning None for empty config files - Search parent directories for config.example.yaml instead of only looking next to config.yaml, fixing detection in common setups Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix: correct skills root path depth and config_version type coercion - loader.py: fix get_skills_root_path() to use 5 parent levels (was 3) after harness split, file lives at packages/harness/deerflow/skills/ so parent×3 resolved to backend/packages/harness/ instead of backend/ - app_config.py: coerce config_version to int() before comparison in _check_config_version() to prevent TypeError when YAML stores value as string (e.g. config_version: "1") - tests: add regression tests for both fixes Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> * fix: update test imports from src.* to deerflow.*/app.* after harness refactor Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> * feat(harness): add tool-first ACP agent invocation (#37) * feat(harness): add tool-first ACP agent invocation * build(harness): make ACP dependency required * fix(harness): address ACP review feedback * feat(harness): decouple ACP agent workspace from thread data ACP agents (codex, claude-code) previously used per-thread workspace directories, causing path resolution complexity and coupling task execution to DeerFlow's internal thread data layout. This change: - Replace _resolve_cwd() with a fixed _get_work_dir() that always uses {base_dir}/acp-workspace/, eliminating virtual path translation and thread_id lookups - Introduce /mnt/acp-workspace virtual path for lead agent read-only access to ACP agent output files (same pattern as /mnt/skills) - Add security guards: read-only validation, path traversal prevention, command path allowlisting, and output masking for acp-workspace - Update system prompt and tool description to guide LLM: send self-contained tasks to ACP agents, copy results via /mnt/acp-workspace - Add 11 new security tests for ACP workspace path handling Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * refactor(prompt): inject ACP section only when ACP agents are configured The ACP agent guidance in the system prompt is now conditionally built by _build_acp_section(), which checks get_acp_agents() and returns an empty string when no ACP agents are configured. This avoids polluting the prompt with irrelevant instructions for users who don't use ACP. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix lint * fix(harness): address Copilot review comments on sandbox path handling and ACP tool - local_sandbox: fix path-segment boundary bug in _resolve_path (== or startswith +"/") and add lookahead in _resolve_paths_in_command regex to prevent /mnt/skills matching inside /mnt/skills-extra - local_sandbox_provider: replace print() with logger.warning(..., exc_info=True) - invoke_acp_agent_tool: guard getattr(option, "optionId") with None default + continue; move full prompt from INFO to DEBUG level (truncated to 200 chars) - sandbox/tools: fix _get_acp_workspace_host_path docstring to match implementation; remove misleading "read-only" language from validate_local_bash_command_paths Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> * fix(acp): thread-isolated workspaces, permission guardrail, and ContextVar registry P1.1 – ACP workspace thread isolation - Add `Paths.acp_workspace_dir(thread_id)` for per-thread paths - `_get_work_dir(thread_id)` in invoke_acp_agent_tool now uses `{base_dir}/threads/{thread_id}/acp-workspace/`; falls back to global workspace when thread_id is absent or invalid - `_invoke` extracts thread_id from `RunnableConfig` via `Annotated[RunnableConfig, InjectedToolArg]` - `sandbox/tools.py`: `_get_acp_workspace_host_path(thread_id)`, `_resolve_acp_workspace_path(path, thread_id)`, and all callers (`replace_virtual_paths_in_command`, `mask_local_paths_in_output`, `ls_tool`, `read_file_tool`) now resolve ACP paths per-thread P1.2 – ACP permission guardrail - New `auto_approve_permissions: bool = False` field in `ACPAgentConfig` - `_build_permission_response(options, *, auto_approve: bool)` now defaults to deny; only approves when `auto_approve=True` - Document field in `config.example.yaml` P2 – Deferred tool registry race condition - Replace module-level `_registry` global with `contextvars.ContextVar` - Each asyncio request context gets its own registry; worker threads inherit the context automatically via `loop.run_in_executor` - Expose `get_deferred_registry` / `set_deferred_registry` / `reset_deferred_registry` helpers Tests: 831 pass (57 for affected modules, 3 new tests) Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> * fix(sandbox): mount /mnt/acp-workspace in docker sandbox container The AioSandboxProvider was not mounting the ACP workspace into the sandbox container, so /mnt/acp-workspace was inaccessible when the lead agent tried to read ACP results in docker mode. Changes: - `ensure_thread_dirs`: also create `acp-workspace/` (chmod 0o777) so the directory exists before the sandbox container starts — required for Docker volume mounts - `_get_thread_mounts`: add read-only `/mnt/acp-workspace` mount using the per-thread host path (`host_paths.acp_workspace_dir(thread_id)`) - Update stale CLAUDE.md description (was "fixed global workspace") Tests: `test_aio_sandbox_provider.py` (4 new tests) Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> * fix(lint): remove unused imports in test_aio_sandbox_provider Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix config --------- Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com> |
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|
lhd
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0091d9f071
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feat(tools): add tool_search for deferred MCP tool loading (#1176)
* feat(tools): add tool_search for deferred MCP tool loading When multiple MCP servers are enabled, total tool count can exceed 30-50, causing context bloat and degraded tool selection accuracy. This adds a deferred tool loading mechanism controlled by `tool_search.enabled` config. - Add ToolSearchConfig with single `enabled` field - Add DeferredToolRegistry with regex search (select:, +keyword, keyword) - Add tool_search tool returning OpenAI-compatible function JSON - Add DeferredToolFilterMiddleware to hide deferred schemas from bind_tools - Add <available-deferred-tools> section to system prompt - Enable MCP tool_name_prefix to prevent cross-server name collisions - Add 34 unit tests covering registry, tool, prompt, and middleware * fix: reset stale deferred registry and bump config_version - Reset deferred registry upfront in get_available_tools() to prevent stale tool entries when MCP servers are disabled between calls - Bump config_version to 2 for new tool_search config field Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix(tests): mock get_app_config in prompt section tests for CI CI has no config.yaml, causing TestDeferredToolsPromptSection to fail with FileNotFoundError. Add autouse fixture to mock get_app_config. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com> |
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DanielWalnut
|
76803b826f
|
refactor: split backend into harness (deerflow.*) and app (app.*) (#1131)
* refactor: extract shared utils to break harness→app cross-layer imports Move _validate_skill_frontmatter to src/skills/validation.py and CONVERTIBLE_EXTENSIONS + convert_file_to_markdown to src/utils/file_conversion.py. This eliminates the two reverse dependencies from client.py (harness layer) into gateway/routers/ (app layer), preparing for the harness/app package split. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * refactor: split backend/src into harness (deerflow.*) and app (app.*) Physically split the monolithic backend/src/ package into two layers: - **Harness** (`packages/harness/deerflow/`): publishable agent framework package with import prefix `deerflow.*`. Contains agents, sandbox, tools, models, MCP, skills, config, and all core infrastructure. - **App** (`app/`): unpublished application code with import prefix `app.*`. Contains gateway (FastAPI REST API) and channels (IM integrations). Key changes: - Move 13 harness modules to packages/harness/deerflow/ via git mv - Move gateway + channels to app/ via git mv - Rename all imports: src.* → deerflow.* (harness) / app.* (app layer) - Set up uv workspace with deerflow-harness as workspace member - Update langgraph.json, config.example.yaml, all scripts, Docker files - Add build-system (hatchling) to harness pyproject.toml - Add PYTHONPATH=. to gateway startup commands for app.* resolution - Update ruff.toml with known-first-party for import sorting - Update all documentation to reflect new directory structure Boundary rule enforced: harness code never imports from app. All 429 tests pass. Lint clean. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * chore: add harness→app boundary check test and update docs Add test_harness_boundary.py that scans all Python files in packages/harness/deerflow/ and fails if any `from app.*` or `import app.*` statement is found. This enforces the architectural rule that the harness layer never depends on the app layer. Update CLAUDE.md to document the harness/app split architecture, import conventions, and the boundary enforcement test. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * feat: add config versioning with auto-upgrade on startup When config.example.yaml schema changes, developers' local config.yaml files can silently become outdated. This adds a config_version field and auto-upgrade mechanism so breaking changes (like src.* → deerflow.* renames) are applied automatically before services start. - Add config_version: 1 to config.example.yaml - Add startup version check warning in AppConfig.from_file() - Add scripts/config-upgrade.sh with migration registry for value replacements - Add `make config-upgrade` target - Auto-run config-upgrade in serve.sh and start-daemon.sh before starting services - Add config error hints in service failure messages Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix comments * fix: update src.* import in test_sandbox_tools_security to deerflow.* Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix: handle empty config and search parent dirs for config.example.yaml Address Copilot review comments on PR #1131: - Guard against yaml.safe_load() returning None for empty config files - Search parent directories for config.example.yaml instead of only looking next to config.yaml, fixing detection in common setups Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix: correct skills root path depth and config_version type coercion - loader.py: fix get_skills_root_path() to use 5 parent levels (was 3) after harness split, file lives at packages/harness/deerflow/skills/ so parent×3 resolved to backend/packages/harness/ instead of backend/ - app_config.py: coerce config_version to int() before comparison in _check_config_version() to prevent TypeError when YAML stores value as string (e.g. config_version: "1") - tests: add regression tests for both fixes Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> * fix: update test imports from src.* to deerflow.*/app.* after harness refactor Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com> |