11 Commits

Author SHA1 Message Date
Aari
0d4d0cb17d
feat(agents): database-backed storage for custom agent definitions (#4359)
* feat(agents): database-backed storage for custom agent definitions

Add an agent_storage.backend switch (default file, behaviour-unchanged) with a
db backend that stores each custom agent as a row in the shared SQL persistence
layer, so a multi-instance deployment sees the same agents on every node
(#4331, #4357). Introduces an AgentStore interface routing all read/write
surfaces, an agents table + migration 0006, startup validation, and a file->db
importer. Follows the thread_meta store / run_events backend-switch /
0003_scheduled_tasks migration patterns; no new dependency.

* fix(agents): make db storage path production-ready (review round 1)

Addresses review feedback on the db/sync agent-storage path:

- sql.py: mirror the async engine's per-connection SQLite PRAGMAs on the sync
  engine (busy_timeout=30000, synchronous=NORMAL, foreign_keys=ON, WAL) so both
  engines behave identically against the shared DB; guard the engine cache with
  a lock (double-checked) so concurrent first-touch cannot build duplicate
  engines or register the connect listener twice.
- routers/agents.py + routers/assistants_compat.py: offload the sync-store reads
  that ran on the event loop (list/get/check, update's pre-read + legacy guard +
  refresh, and assistants_compat's four list routes) via asyncio.to_thread — on
  db+postgres each was a network round trip stalling the loop. Writes were
  already offloaded.
- file.py: translate the create() mkdir(exist_ok=False) race FileExistsError
  into AgentExistsError (router 409, matching SqlAgentStore's IntegrityError
  path); correct the _write docstring — per-file atomic replace, two commits
  sequential not transactional.

Tests: sync-engine PRAGMA + engine-cache reuse assertions; file create-race ->
AgentExistsError; strict Blockbuster anchor over the read endpoints so a
regression back onto the loop fails CI.

* fix(agents): address round-2 review on the db store path

- update_agent tool: align the docstring/inline comment with FileAgentStore._write.
  Cross-field write atomicity is db-only; the file backend commits config then
  soul via two sequential os.replace (a crash between them can leave a fresh
  config.yaml beside a stale SOUL.md). The dropped partial-write *reporting* is
  an intentional tradeoff — the stage-then-replace safety is preserved
  (test_update_agent_soul_failure_does_not_replace_config still holds).
- SqlAgentStore.update(): true upsert. Catch IntegrityError on the
  insert-on-missing branch, re-fetch and apply, so two concurrent first-time
  writes (e.g. two setup_agent handshakes) converge instead of surfacing a raw
  UNIQUE(user_id, name) violation as a 500. Symmetric with create().
- get_agent_store(): document the graph-subprocess config-resolution invariant
  (the except->file fallback is a genuine no-config path, not a mask for a
  misconfigured graph process) and pin it with two tests driving the real
  get_app_config() file resolution: db resolves from an on-disk config.yaml,
  file fallback when config is unresolvable.

* test(agents): cover SqlAgentStore.update() write-race upsert recovery

Mandatory-TDD test for the round-2 fix in 0680340a: two concurrent first-time
update()s where the loser's insert hits UNIQUE(user_id, name). Deterministically
forces the IntegrityError recovery path by making the first _row probe miss the
committed winner, and asserts last-writer-wins instead of a surfaced 500.
2026-07-23 08:03:21 +08:00
Ryker_Feng
20debf9cc7
feat(agents): per-agent model and generation settings (#4347)
* feat(agents): per-agent model and generation settings

Let each custom agent choose its own model and sampling settings
(temperature, max_tokens) plus thinking / reasoning_effort defaults,
so agents sharing a model profile are no longer stuck with one shared
temperature and output length (#4336).

AgentConfig gains optional model_settings / thinking_enabled /
reasoning_effort (None = inherit). create_chat_model applies per-caller
model_overrides on top of the profile before the thinking/Codex
transforms; the lead agent resolves each knob with precedence
request > agent config > profile/default. The /api/agents create/update
routes persist the fields and reject an unknown model. The default lead
agent path is unchanged (no agent config -> overrides None). The agent
chat composer also stops force-overriding an agent's configured default
model with models[0].

* fix(agents): tri-state thinking control and default-model capability gating

The model-settings dialog seeded the thinking switch to false, so opening
it to tweak temperature and saving silently disabled thinking (the runtime
default is on) with no way back to inherit. It also hid the thinking /
reasoning controls whenever the agent inherited the global default model,
since `__default__` never resolved through `models.find`.

Give thinking an explicit Inherit / On / Off tri-state so an untouched save
is a no-op, and resolve `__default__` to the effective default (models[0])
for the capability check. Logic lives in the tested helpers module.
2026-07-22 13:44:55 +08:00
Huixin615
65afc9b1d2
fix(skills): apply allowed-tools only to active skills (#4098)
* fix(skills): scope allowed-tools to active skills

* fix(skills): tolerate stale active skill paths

* chore: retrigger CI

* fix(skills): document policy activation limits

* perf(skills): reuse per-step tool policy decisions

* fix(skills): harden runtime tool policy contracts

* fix(skills): redact cached policy decisions

* fix(skills): make slash tool policy authoritative

* fix(skills): preserve policy-safe discovery tools

* test(skills): cover explicit task delegation policy
2026-07-16 14:12:02 +08:00
qin-chenghan
a94ea9325b
fix(agents): load SOUL.md from agent dirs without config.yaml (#4136)
* fix(agents): load SOUL.md from agent dirs without config.yaml (#4135)

resolve_agent_dir requires config.yaml to be present in an agent
directory (added in #3481 to fix #3390, where memory-only directories
were mistaken for agent directories). However, SOUL.md loading does
not depend on config.yaml. When an agent is configured externally
(e.g. via DEER_FLOW_CONFIG_PATH) and the agent directory contains
SOUL.md but no config.yaml, resolve_agent_dir skips the directory
and load_agent_soul returns None.

Add a fallback in load_agent_soul: if the resolved directory does not
contain SOUL.md, check the per-user and legacy directories directly
for SOUL.md. This preserves the #3390 fix for resolve_agent_dir
(which is also used by load_agent_config) while allowing SOUL.md
to load independently of config.yaml.

* fix(agents): gate SOUL.md fallback on missing config.yaml per review

Address review feedback on PR #4136:

1. Gate the fallback condition on not (agent_dir / config.yaml).exists()
   so it only fires when resolve_agent_dir returned its default path (no
   agent dir qualified), not when a properly-resolved per-user agent simply
   lacks SOUL.md. This preserves the per-user shadowing invariant.

2. Fix test_loads_soul_from_user_dir_without_config_yaml to actually
   exercise the fallback path: per-user memory-only dir (no config.yaml,
   no SOUL.md) + legacy dir with SOUL.md (no config.yaml) -> fallback
   finds legacy SOUL.md.

3. Add test_soul_not_leaked_from_legacy_when_per_user_has_config to
   verify the gate prevents legacy SOUL.md leaking into a per-user agent.

4. Patch get_effective_user_id in test_loads_soul_without_config_yaml
   for consistency and resilience.
2026-07-13 21:13:33 +08:00
Daoyuan Li
74392e1470
Fix require_mention gating on whitespace-only bot_login/mention_login (#4055)
github.bot_login and trigger.mention_login were read raw in the
require_mention precedence chain, so a whitespace-only value (e.g. "   ")
never fell through to the working fallback the chain documents -
Python truthiness lets "   " win an `or` chain over agent.name or the
operator default. The third link (channels.github.default_mention_login)
was already correctly normalized and pinned by
test_operator_default_blank_string_treated_as_none; this closes the gap
for the other two by normalizing GitHubTriggerConfig.mention_login and
GitHubAgentConfig.bot_login once, at the config layer, via a
field_validator mirroring the pattern already used elsewhere in the
config package.
2026-07-12 15:51:22 +08:00
Zheng Feng
dcb2e687d5
feat(channels): add GitHub as a webhook-driven channel (#3754)
* feat(channels): add GitHub event-driven agents (#3754)

Add a webhook-driven GitHub channel with fail-closed webhook routing, deterministic per-agent PR/issue threads, mention-gated trigger fan-out, GitHub App token injection for sandboxed gh/git commands, and backend/AGENTS.md documentation.

* fix(llm-middleware): classify bare IndexError as transient

Upstream chat providers occasionally return 200 OK with an empty
generations list (observed against Volces "coding" on
ark.cn-beijing.volces.com). When that happens,
langchain_core.language_models.chat_models.ainvoke raises
``IndexError: list index out of range`` at
``llm_result.generations[0][0].message`` and kills the run.

Treat a bare IndexError reaching the middleware as a transient
upstream-payload glitch and route it through the existing
retry/backoff path instead of failing the whole agent run. The
retry budget and backoff schedule are unchanged.

Adds three regression tests covering the classifier and both the
recover-on-retry and exhausted-retries paths.

* fix(runtime): ignore stale LLM fallback markers from prior runs

When a run on a thread ends with the LLM-error-handling middleware emitting
a `deerflow_error_fallback`-marked AIMessage (e.g. after the IndexError
empty-generations classification fix lands), that message is persisted to
the thread's checkpoint as part of the messages channel. LangGraph replays
the full message history in `stream_mode="values"` chunks, so every
subsequent run on the same thread re-streams the stale fallback marker —
and the worker's chunk scanner faithfully picks it up, flipping
`RunStatus.success` to `RunStatus.error` for runs that themselves had
no LLM failure at all.

Snapshot the set of pre-existing message ids from the pre-run checkpoint
and thread it through `_extract_llm_error_fallback_message` /
`_try_extract_from_message` as a filter. Markers on history messages are
ignored; markers on fresh messages produced during this run still trip
the error path. Falls back to an empty set when the checkpointer is
absent or the snapshot can't be captured, preserving the prior behavior
on first-run / no-state paths.

Adds unit tests for the new filter (helper-level and `_collect_pre_existing_message_ids`)
plus an integration test exercising the full `run_agent` path with a stale
history checkpointer.

* fix(channels): make github channel fire-and-forget to avoid httpx.ReadTimeout on long runs

GitHub agent runs (clone -> edit -> test -> push -> PR) routinely exceed
the langgraph_sdk default 300s read deadline. The manager's runs.wait
call kept an HTTP stream open for the entire run lifetime, so the long
run blew up with httpx.ReadTimeout and the outer except branch then
released the dedupe key and emitted a false 'internal error' outbound.

The GitHub channel's outbound send is log-only by design: agents post to
the issue/PR via the gh CLI in the sandbox when they choose to comment
or create a PR. There is nothing for the manager to ferry back, so the
long-poll was pure overhead.

This change adds ChannelRunPolicy.fire_and_forget (default False) and
sets it True for the github channel. When fire_and_forget is True,
_handle_chat dispatches via client.runs.create (short POST, returns
once the run is pending) instead of client.runs.wait, and skips the
response-extraction + outbound-publish block. ConflictError on a busy
thread still trips the standard THREAD_BUSY_MESSAGE path so behavior on
the busy case is preserved for any future non-github fire-and-forget
channel.

Other (non-github) channels are unchanged: their policy defaults
fire_and_forget=False and they continue to dispatch via runs.wait.

Adds 6 regression tests in tests/test_channels.py::TestGithubFireAndForget:
- Default ChannelRunPolicy.fire_and_forget is False.
- The github policy registers fire_and_forget=True.
- github inbound calls runs.create, not runs.wait, with the right kwargs.
- github inbound publishes no outbound on success.
- ConflictError from runs.create still emits THREAD_BUSY_MESSAGE.
- Non-github channels (slack) still dispatch via runs.wait.

* test(lead-agent): accept user_id kwarg in skill-policy test stubs

The two GitHub-channel tests added in #3754 stubbed
_load_enabled_skills_for_tool_policy with a lambda that only accepted
`available_skills` and `app_config`, but the real function (and its call
site in agent.py) also passes `user_id`. This raised TypeError on every
run, failing backend-unit-tests.

Add `user_id=None` to match the three sibling stubs in the same file.

* refactor(gateway): disambiguate context-key set names

The two frozensets _INTERNAL_ONLY_CONTEXT_KEYS and _CONTEXT_ONLY_KEYS
shared a confusable "CONTEXT_ONLY" token in different orders, and the
first broke the _CONTEXT_<X>_KEYS pattern of its sibling
_CONTEXT_CONFIGURABLE_KEYS. Rename to make the distinct axes explicit:

  _CONTEXT_INTERNAL_CALLER_KEYS  - WHO: internal callers (scheduler) only
  _CONTEXT_RUNTIME_ONLY_KEYS     - WHERE: runtime context only, never configurable

Pure rename, no behavior change.
2026-07-04 22:56:24 +08:00
hataa
b3c2cc42cf
fix(agents): require config.yaml in resolve_agent_dir to skip memory-only directories (#3390) (#3481)
When memory is enabled, the first conversation with a legacy shared agent
creates a per-user agent directory containing only memory.json (no
config.yaml). On the second turn, resolve_agent_dir() returned this
incomplete directory, causing load_agent_config() to fail with
"Agent config not found".

Require config.yaml to exist alongside the directory for both the
per-user and legacy paths, so that memory-only directories fall
through correctly. This aligns resolve_agent_dir with the existing
config.yaml check in list_custom_agents.

Refs: https://github.com/bytedance/deer-flow/issues/3390
2026-06-10 23:57:17 +08:00
yangzheli
59c4a3f0a4
feat(agent): add custom-agent self-updates with user isolation (#2713)
* feat(agent): add update_agent tool for in-chat custom-agent self-updates (#2616)

Custom agents had no built-in way to persist updates to their own SOUL.md /
config.yaml from a normal chat — `setup_agent` was only bound during the
bootstrap flow, so when the user asked the agent to refine its description
or personality, the agent would shell out via bash/write_file and the edits
landed in a temporary sandbox/tool workspace instead of
`{base_dir}/agents/{agent_name}/`.

Changes:
- New `update_agent` builtin tool with partial-update semantics (only the
  fields you pass are written) and atomic temp-file + os.replace writes so
  a failed update never corrupts existing SOUL.md / config.yaml.
- Lead agent now binds `update_agent` in the non-bootstrap path whenever
  `agent_name` is set in the runtime context. Default agent (no
  agent_name) and bootstrap flow are unchanged.
- New `<self_update>` system-prompt section is injected for custom agents,
  instructing them to use `update_agent` — and explicitly NOT bash /
  write_file — to persist self-updates.
- Tests: 11 new cases in `tests/test_update_agent_tool.py` covering
  validation (missing/invalid agent_name, unknown agent, no fields),
  partial updates (soul-only, description-only, skills=[] vs omitted),
  no-op detection, atomic-write safety, and AgentConfig round-tripping;
  plus 2 new cases in `tests/test_lead_agent_prompt.py` covering the
  self-update prompt section.
- Docs: updated backend/CLAUDE.md builtin tools list and tools.mdx
  (en/zh) with the new tool description.

* feat(agent): isolate custom agents per user

Store custom agent definitions under the effective user, keep legacy agents readable until migration, and cover API/tool/migration behavior with tests.

Co-authored-by: Cursor <cursoragent@cursor.com>

* feat: consistent write/delete targets & add --user-id to migration

---------

Co-authored-by: Cursor <cursoragent@cursor.com>
2026-05-05 23:17:42 +08:00
Hinotobi
2176b2bbfc
fix: validate bootstrap agent names before filesystem writes (#2274)
* fix: validate bootstrap agent names before filesystem writes

* fix: tighten bootstrap agent-name validation
2026-04-16 08:36:42 +08:00
knukn
f8fb8d6fb1
feat/per agent skill filter (#1650)
* feat(agent): 为AgentConfig添加skills字段并更新lead_agent系统提示

在AgentConfig中添加skills字段以支持配置agent可用技能
更新lead_agent的系统提示模板以包含可用技能信息

* fix: resolve agent skill configuration edge cases and add tests

* Update backend/packages/harness/deerflow/agents/lead_agent/prompt.py

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

* refactor(agent): address PR review comments for skills configuration

- Add detailed docstring to `skills` field in `AgentConfig` to clarify the semantics of `None` vs `[]`.
- Add unit tests in `test_custom_agent.py` to verify `load_agent_config()` correctly parses omitted skills and explicit empty lists.
- Fix `test_make_lead_agent_empty_skills_passed_correctly` to include `agent_name` in the runtime config, ensuring it exercises the real code path.

* docs: 添加关于按代理过滤技能的配置说明

在配置示例文件和文档中添加说明,解释如何通过代理的config.yaml文件限制加载的技能

---------

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
2026-04-02 15:02:09 +08:00
DanielWalnut
76803b826f
refactor: split backend into harness (deerflow.*) and app (app.*) (#1131)
* refactor: extract shared utils to break harness→app cross-layer imports

Move _validate_skill_frontmatter to src/skills/validation.py and
CONVERTIBLE_EXTENSIONS + convert_file_to_markdown to src/utils/file_conversion.py.
This eliminates the two reverse dependencies from client.py (harness layer)
into gateway/routers/ (app layer), preparing for the harness/app package split.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* refactor: split backend/src into harness (deerflow.*) and app (app.*)

Physically split the monolithic backend/src/ package into two layers:

- **Harness** (`packages/harness/deerflow/`): publishable agent framework
  package with import prefix `deerflow.*`. Contains agents, sandbox, tools,
  models, MCP, skills, config, and all core infrastructure.

- **App** (`app/`): unpublished application code with import prefix `app.*`.
  Contains gateway (FastAPI REST API) and channels (IM integrations).

Key changes:
- Move 13 harness modules to packages/harness/deerflow/ via git mv
- Move gateway + channels to app/ via git mv
- Rename all imports: src.* → deerflow.* (harness) / app.* (app layer)
- Set up uv workspace with deerflow-harness as workspace member
- Update langgraph.json, config.example.yaml, all scripts, Docker files
- Add build-system (hatchling) to harness pyproject.toml
- Add PYTHONPATH=. to gateway startup commands for app.* resolution
- Update ruff.toml with known-first-party for import sorting
- Update all documentation to reflect new directory structure

Boundary rule enforced: harness code never imports from app.
All 429 tests pass. Lint clean.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* chore: add harness→app boundary check test and update docs

Add test_harness_boundary.py that scans all Python files in
packages/harness/deerflow/ and fails if any `from app.*` or
`import app.*` statement is found. This enforces the architectural
rule that the harness layer never depends on the app layer.

Update CLAUDE.md to document the harness/app split architecture,
import conventions, and the boundary enforcement test.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* feat: add config versioning with auto-upgrade on startup

When config.example.yaml schema changes, developers' local config.yaml
files can silently become outdated. This adds a config_version field and
auto-upgrade mechanism so breaking changes (like src.* → deerflow.*
renames) are applied automatically before services start.

- Add config_version: 1 to config.example.yaml
- Add startup version check warning in AppConfig.from_file()
- Add scripts/config-upgrade.sh with migration registry for value replacements
- Add `make config-upgrade` target
- Auto-run config-upgrade in serve.sh and start-daemon.sh before starting services
- Add config error hints in service failure messages

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix comments

* fix: update src.* import in test_sandbox_tools_security to deerflow.*

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: handle empty config and search parent dirs for config.example.yaml

Address Copilot review comments on PR #1131:
- Guard against yaml.safe_load() returning None for empty config files
- Search parent directories for config.example.yaml instead of only
  looking next to config.yaml, fixing detection in common setups

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: correct skills root path depth and config_version type coercion

- loader.py: fix get_skills_root_path() to use 5 parent levels (was 3)
  after harness split, file lives at packages/harness/deerflow/skills/
  so parent×3 resolved to backend/packages/harness/ instead of backend/
- app_config.py: coerce config_version to int() before comparison in
  _check_config_version() to prevent TypeError when YAML stores value
  as string (e.g. config_version: "1")
- tests: add regression tests for both fixes

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix: update test imports from src.* to deerflow.*/app.* after harness refactor

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-14 22:55:52 +08:00